Vitis riparia (riverbank grape): 117905107
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Entry
117905107 CDS
T07274
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 7
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117905107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vri04121
]
117905107
Enzymes [BR:
vri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117905107
Ubiquitin system [BR:
vri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
117905107
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
zf-C3HC4_2
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
117905107
NCBI-ProteinID:
XP_034673902
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Position
17:7214873..7223615
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AA seq
355 aa
AA seq
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MAKLRFSEDDCDDALPVKVVLARERRIAYRFRIGGAGQPGMSSDEEHDSSCSSEGSDDDA
DDSADENVEIVDDEHGQEIVEPVRDPGQGTSSGSEANRDASVSVILTDPEVLDCSICLEP
LSVPVFQCENGHTACSSCCTKLSNRCPSCSWPIGYNRCRAIEKVLESVKVSCQNTAYGCK
ETVSYSKKHDHEVTCNYVPCSCPHSNCNFRGSSKQLAQHFRSKHLNSVIRFQYNSFFPVH
LEFNAVDKFCILEAKEGALFIVSSSIQQLGHAVTVCRIGPRSSRGHAFNLAAWKGDRSIM
LQSFTENIREVIELPSLSMGFLLIPSAFLGSSGQLKLELCIRGNNARPAKKIKLK
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagttaaggttttcagaagacgattgcgacgatgctttgccagtgaaggtggtg
ctcgcaagagaacggagaatagcctacagatttagaattggaggtgcagggcaaccgggg
atgtcctctgacgaagaacatgacagctcctgctcatctgaagggtcggatgatgatgcg
gatgattccgcggacgagaatgtggaaattgttgatgatgaacatggacaagaaatcgtg
gagccagtgcgagacccaggtcagggaacaagttcgggaagcgaggctaatagagatgct
tcggtttctgtgatcctgactgacccggaagtgcttgattgctccatttgccttgaaccc
ttgagcgttcccgtatttcagtgtgagaatgggcatacagcatgctcttcctgctgcacc
aaactcagcaacagatgcccgtcctgctcctggcctattggctataaccgttgccgggct
attgaaaaggttcttgaatcagtcaaagtatcatgccaaaacacagcatatggctgcaaa
gaaacagtgagttacagtaagaaacatgaccacgaggtgacatgcaactacgtaccatgt
tcatgccctcattccaactgcaacttccggggatcatccaaacagctagctcaacacttc
agaagtaaacatctgaattcagtgatacgcttccagtacaacagcttcttccctgttcat
ttggaatttaatgcagtggacaagttctgcattctagaagcaaaagaaggtgccctattc
attgttagtagctctattcaacagcttgggcatgcagtcacagtttgtcgtattgggcct
agatcatctagagggcatgcattcaatcttgcagcatggaaaggggacaggtcgatcatg
ttacaatcattcacggagaatattagagaagttattgaacttccttctctttcaatggga
tttcttctaattccaagcgcattcctgggttcttcaggacagttgaagttggagctgtgt
ataagggggaacaatgcacgtcctgcaaaaaaaataaagctgaagtag
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