Vitis riparia (riverbank grape): 117905166
Help
Entry
117905166 CDS
T07274
Name
(RefSeq) serine/threonine-protein kinase RIO1-like
KO
K07178
RIO kinase 1 [EC:
2.7.11.1
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117905166
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
vri01001
]
117905166
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vri03009
]
117905166
Enzymes [BR:
vri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
117905166
Protein kinases [BR:
vri01001
]
Serine/threonine kinases: Other
RIO family [OT]
117905166
Ribosome biogenesis [BR:
vri03009
]
Eukaryotic type
Pre-40S particles
Kinases
117905166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIO1
Pkinase_fungal
CCDC106
Motif
Other DBs
NCBI-GeneID:
117905166
NCBI-ProteinID:
XP_034673982
LinkDB
All DBs
Position
17:complement(19781176..19786946)
Genome browser
AA seq
552 aa
AA seq
DB search
MPITGEKPEEVEPLVVEGDDDGEEEEEEDSWSSDSEIGEALDWLDTKDGSEVGVDGPISL
NSRRPNAHGGLHSRTNASTLQPLSNRNQKFSNHIHASPLEEWEGRLNVGMSNSVTTAIRE
SVRGMAIGKTKTTEKADRATVEQAIDPRTRMVLFKMLNRGVFHDINGCISTGKEANVYHA
TKSDGHELAIKVYKTSVLVFKDRDRYVQGDYRFRHGYCKHNPRKMVKTWAEKEMRNLLRL
KAAGIRCPTPYLLRLHVLVMEFIGKAGWAAPRLKDAALSLDKLREGYVEMIMAMRTLYQK
CKLVHGDLSEYNILYFEGHLHVIDVSQAVDLDHPHALDFLREDCVHVSDFFKKHGVAVMT
IRELFDFIVDPTITDESVDDYLEQVQQKILAREISPEDEIADSVFVQSFIPKTLEDVKNA
EQDVIRLTSGKDTTDMYYKTITGLKQALSLSQPSPPQTEPPRKENSSLDPTAHSNSGEDI
IESGTDGDEENSSDAESGSSSEFETQTPIDKKAARKENKKKVKEEKREARKTKVPKAVKK
RKKKLAKAHKTR
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgcctataactggagaaaaaccagaggaagtagaaccactagtggtggaaggtgatgat
gacggagaagaagaagaggaagaagattcgtggtcatcggattccgaaatcggagaagcc
ctagactggttggacacgaaagatggcagtgaagttggcgtggatggaccgattagtcta
aactcgaggcgtccaaatgctcatggagggcttcactctcgcactaatgcatcgacgcta
caacctctctcgaaccggaaccagaagttctccaatcacatccatgcttcaccattggag
gagtgggaggggaggttgaatgttggcatgtcaaactctgtgacaactgccattcgtgaa
agtgttcgagggatggccattggtaaaactaaaaccaccgagaaagcagaccgtgcaact
gttgaacaggctattgatcctagaactcgcatggttttattcaaaatgctgaatcgaggt
gtgttccatgatattaacggctgcatttcaactggaaaagaagcaaatgtttatcatgcc
acaaaatccgatggtcacgaacttgcaattaaagtgtacaaaacttctgttctagtattt
aaggatagagatcggtatgtacaaggagactaccgtttcagacatggatactgcaagcac
aatccaaggaaaatggtaaagacatgggctgagaaagaaatgagaaatcttttgaggtta
aaggcagcaggaatcaggtgcccaactccgtacctattgaggcttcatgttttagtcatg
gaattcataggaaaggcaggttgggctgcacctcgtcttaaggatgctgctttatctctt
gacaaattgcgtgaaggttatgtggagatgattatggcaatgcggacgttatatcagaag
tgcaaactggtacatggagacctcagtgaatataacatactttattttgagggccactta
catgttattgatgtttctcaagcagttgatcttgaccatcctcatgcccttgactttcta
cgtgaagattgtgtccatgtttctgatttttttaaaaaacatggtgtagctgttatgaca
attcgagaactgtttgatttcatagttgatccaaccattactgatgagtcagtggatgat
tatctggaacaggttcaacaaaagattttggcaagagagatatctccagaggatgagatt
gcagattctgtatttgtacagtcttttattcccaagacactagaagatgtgaagaatgcc
gagcaggatgtaatccggctaacaagtggcaaggacactacagacatgtactataaaact
attacaggactcaaacaagctctttctctatctcaaccttctcctccacaaaccgagccg
ccccgtaaagaaaactcctctctggatccaactgctcattctaactcaggcgaagacata
atagaatctgggacagatggggatgaagagaactcaagtgacgcagagagtggttcctcg
tctgaattcgagacacagactcccatcgataagaaagctgcccgaaaagagaacaagaag
aaggtgaaagaagagaagagggaagcccggaagaccaaggtgccaaaggcagtgaagaaa
cgaaagaagaaactggccaaagctcacaagaccaggtag
DBGET
integrated database retrieval system
