Vitis riparia (riverbank grape): 117905376
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Entry
117905376 CDS
T07274
Name
(RefSeq) heterogeneous nuclear ribonucleoproteins A2/B1-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117905376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vri03019
]
117905376
Messenger RNA biogenesis [BR:
vri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
117905376
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
TA0956
Motif
Other DBs
NCBI-GeneID:
117905376
NCBI-ProteinID:
XP_034674187
LinkDB
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Position
18:complement(7042373..7044972)
Genome browser
AA seq
507 aa
AA seq
DB search
MAEQVKLFVGGVSGAITEGLLRDYFSKYGTVVETYIRRDSGRTPRGGFGFVTFADAASLS
RALQDQQQHFIQGQRVEVKRAMNKGQRNLDGSGNNNFTSKKIFVGGLSSNLTEEEFKNYF
ERFGRITDVVVMHDSATRRPRGFGFITFESEESVEHVMQNNFYELNGKRVEVKRAVPKEA
NNNNKNGYNMRMGGGRGSSFPLHGQNLPYAPAPGYEIFPGYFPYSGYGCIENYCYAATSM
YPGGYFMGENAGIDYGRTPFQHPWNGPGSLGSAIMYPPYSSGRNMVAGSSNGLVGPRTSS
RSQADATPTPSQNDSSLEDANGNFNPPSLALNNSVGGKLGIVCNGEAPNSAGENSGPHSL
KDDGAVSSPLKEDGSNMVCNGEAPTSAGENSGPHSLKDDGAVSSPLKEDGSEFSSHLKVD
CAASPSDSKDDGTVSPSDSFDGAAPPDTKDDGVASSSDSHDNGSTCSLNTSTDNLKCNGA
ASNSSYDIQNQNDIDEQLKPSPDCDSS
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcaggtcaagttgttcgttggtggagtttccggcgccatcaccgaagggctg
ctgagggactacttcagcaagtacggtactgttgtggagacttacattagaagggattct
gggagaacgcctagagggggctttggatttgttacttttgctgacgctgcttccctcagt
agagctctccaggatcagcagcagcattttatacaaggacaaagggtcgaagtgaaaagg
gcgatgaacaaaggtcagagaaatttagatggtagtggcaataataattttacgtcgaaa
aagatctttgttggagggctgtcatctaatctaacagaggaagaattcaagaattacttt
gagaggtttggtagaattacggatgtagttgtgatgcacgatagcgctactcgccgcccg
aggggatttgggttcattacttttgagtctgaggaatccgttgagcatgttatgcagaat
aacttctatgagttaaatggaaagcgtgtggaggtgaagagagccgtgccaaaagaagca
aacaacaataataaaaatggttataatatgaggatgggtggtggaagagggtcttccttt
cctctgcatgggcagaacttgccttatgctcctgctcctggatatgagatttttccaggt
tattttccttattcaggatatggctgtattgaaaattattgttatgctgcaactagcatg
tatcctggtggttactttatgggagagaatgctggaattgactatggaaggacacctttt
cagcacccttggaatggccctggatctcttggcagtgctatcatgtatcctccatactca
agtggtaggaacatggttgctggttcgtctaatgggcttgtagggccaagaacaagctct
agatcacaagctgatgcgaccccaaccccatctcagaatgactcttccttggaggatgct
aatggtaacttcaatcctccctctttggccctgaacaattcagttgggggaaagttgggt
atagtttgcaatggtgaagctcctaattcggctggggagaactctggacctcattctttg
aaggatgatggtgctgtttcttcacctttgaaagaagatggttcaaatatggtttgcaat
ggtgaagctcctacttcggctggggagaactctggacctcattctttgaaggatgatggt
gctgtttcttcacctttgaaagaagatggttctgaattttcttcgcatttgaaggttgat
tgtgctgcatctccttcagattcaaaggatgatggtactgtttctccttcagattccttt
gatggtgctgctcctccagatacgaaggatgatggtgtggcttcttcttcagattcgcac
gacaatggttctacttgtagcttgaatacaagcactgataatttgaagtgcaatggtgct
gcttctaattctagttacgacatacaaaatcaaaatgatattgatgaacaacttaagcct
tcccctgattgtgattctagctga
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