Vitis riparia (riverbank grape): 117905580
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Entry
117905580 CDS
T07274
Name
(RefSeq) protein FIZZY-RELATED 2-like
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117905580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vri04121
]
117905580
Ubiquitin system [BR:
vri04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
117905580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
EIF3I
WD40_Gbeta
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
WDR55
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
eIF2A
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
NBCH_WD40
Beta-prop_HPS5
KNTC1_N
Beta-prop_DCAF4
Beta-prop_SCAP
Peptidase_M10_C
Beta-prop_WDR41
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
Beta-prop_SPT8
ELYS-bb
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
117905580
NCBI-ProteinID:
XP_034674369
LinkDB
All DBs
Position
2:15481965..15492876
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AA seq
497 aa
AA seq
DB search
MDDPTTPSTTNPSALRSSSGLNLPSTMSKTPLSLEPVTPSTHIERMISVGYQPSPSRTIY
SDRFIPSRTGSNFALFDISPSANSPAEGREDGSGAYATLLRTALFGPDAGVCSPGTPDKL
MRLDGKNSSVYPSSRNIFRYKTETRQSMHSLSPFGFEDALPGVSHGPVKAARKVPRSPYK
VLDAPALQDDFYLNLVDWSAHNVLAVGLGNCVYLWNACSSKVTKLCDLGMDVSVCSVGWA
QRGTHLAVGTSNGKLQIWDASRCKRVRTMEGHRLRIGALAWSSSMLSSGSRDKTILQRDI
RAQDDFVNKLAGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYCEHTAAVK
AIAWSPHLHGLLASGGGTADRCIRFWNTTTNSHLSCMDTGSQVCNLVWSKNVNELVSTHG
YSQNQIIVWRYPTMSKLATLTGHTYRVLYLAISPDGQTIVTGAGDETLRFWNVFPSPKSQ
NTDSEIGASSLGRTQIR
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcccacaacaccttcaacaaccaacccatcagctctcagaagctcctcaggg
ttaaatctaccttctacaatgtcgaagacccctctatctctcgaacccgtaaccccgtcg
acccacatcgagcgtatgatcagtgtaggttatcagccgtcgccgtcgagaacgatttac
agcgatagattcatccccagcagaacaggttccaattttgcgctcttcgacatctccccg
tcagctaactcgccggcggaggggcgagaggatggctctggcgcgtatgcgacgttgttg
aggacggccctattcgggcccgatgccggagtctgttccccaggcacgccggataagttg
atgagattggatgggaagaattcttctgtgtatccgtcgagccggaatatttttcggtac
aagacggagactcggcagtcgatgcactcgctgtcgccgttcgggtttgaagatgcattg
ccgggcgtgagtcatggcccagtcaaggcagcacggaaggttcctcgatcgccttataag
gttttggatgctccggcattacaagatgatttttatctgaatctcgttgattggtccgcg
cataatgtgttggcagttgggttgggcaattgtgtctatttatggaatgcttgtagtagc
aaggtgacaaaattgtgtgatctgggaatggatgtaagtgtctgttcagtaggctgggca
cagcgtggcacacatcttgctgttggaactagtaatggaaaactccagatttgggatgca
tctcgctgcaagagagtgcgaactatggagggtcatcggttacgtattggagctctagcc
tggagctcatccatgttgtcttcaggtagtcgggataaaacaattcttcaacgtgatata
cgtgctcaggatgattttgttaataagctcgctggacacaagtcagaggtttgtggattg
aagtggtcttatgataaccgtgagttagcatcaggaggaaatgataatagactttttgtt
tggaatcaacattcaactcaacctgtcctaaaatactgtgagcatacagcagctgtaaaa
gccatagcatggtccccccatcttcatggtcttcttgcatctgggggtggtacagcagac
cgctgcattcgattctggaatacaaccactaactcacacctgagctgcatggacaccggc
agtcaggtatgcaaccttgtctggtctaaaaatgtcaatgaacttgtaagcacccatggg
tactcccagaatcaaataatagtttggagatatcctaccatgtcaaagctggcaaccctt
accggccatacgtatagagttctttatcttgccatctcccccgatggacagacaatcgtc
acaggagcaggagatgaaacacttcggttttggaatgtcttcccttctcccaaatcacag
aatactgatagtgaaattggagcatcatcccttggaagaactcaaatccgatga
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