Vitis riparia (riverbank grape): 117905962
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Entry
117905962 CDS
T07274
Name
(RefSeq) isoamylase 3, chloroplastic isoform X1
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00500
Starch and sucrose metabolism
vri01100
Metabolic pathways
vri01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
117905962
Enzymes [BR:
vri01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
117905962
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GFIT
Motif
Pfam:
Alpha-amylase
CBM_48
ISOA1-3_C
Isoamylase_C
Alpha-amylase_C
DUF5696
Motif
Other DBs
NCBI-GeneID:
117905962
NCBI-ProteinID:
XP_034674749
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Position
18:4951297..5010778
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AA seq
787 aa
AA seq
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MDAFLSSPKTPKMIHPLVGESNAKFPLFSALSNRDSGASSFGTSRIIGMGLLLSKKVSGS
NMKRTVSKTWDCLRPRATNAYGRHAQDRVLEEEAPQIAETSPSLKVLPGQAFPLGVSEVE
NGINFAIFSQHATAVVLCLFLPQRGRKDRMDDLMVELTLDADVNRTGDIWHICVEDLPRS
NVLYGYRIDGPRGWHQGHRFDNSTVLIDPYAKLVEGRRFFGDASNKWSKFLGTYDFDSLP
FDWGDNYKVPSIPEKDLVIYEMNVRAFTADKSSGLDPNVRGSYLGVIEKIPHLLDLGINA
VELLPVFEFDEFEFQRRPNPRDHMINTWGYSTINFFAPMSRYASAGGGPIKASRELKEMV
KALHGAGIEVILDVVYNHTNEADDENPYTTSFRGIDNKVYYMVDLNNEGQLLNFSGCGNT
LNCNHPMVMELILDSLRHWVIEYHVDGFRFDLASVLCRGTDGSPLNAPPIIREIAKDDIL
SRCKIIAEPWDCGGLYLVGRFPNWDRWAEWNGKYRDDLRRFIKGDPGTKGNFATRVAGSS
DLYKVNKRKPYHSVNFVIAHDGFTLYDLVSYNSKHNNANGEGGKDGTNDNFSWNCGFEGE
TADAKIKALRSRQMKNFHLALMCSQGTPMMLMGDEYGHTRYGNNNSYGHDTAINHFLWGQ
LDSRKRDRFRFFKEVIKFRRMHHVFGRENFLDKKDVTWHEDNWDNYESKFLAFTLHANNG
GDIYLAFNTHDFFVKVAIPSPPANRRWFRVVDTNLESPKDFVSEGVPGIGSAYNVAPYSS
ILLEAKL
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggatgcctttctttcatctccaaagactccaaagatgatccacccacttgttggcgaa
tcaaacgccaagtttcctctcttttctgctctttccaaccgcgattccggtgcttcttct
ttcggaacttctcgtattatcggaatggggttgctactaagtaagaaagtttccggcagc
aacatgaaaagaactgtcagtaagacatgggactgtctcaggcctagagcgactaatgct
tatggtcgtcatgctcaagatcgtgtgcttgaggaagaagcccctcagatagcagagaca
agcccatcgttgaaagttttaccaggtcaggcatttccactaggagtatcagaagttgag
aatgggatcaactttgctattttttcacaacatgcgactgcagtcgtgctttgcttattt
cttccccaaaggggaaggaaagacaggatggatgacttgatggtggagctgacactggat
gctgatgtgaatagaacaggagacatatggcacatatgtgttgaggatttgcctcggagc
aatgttctttatggttatcgcatagatggtcctcgaggttggcatcaagggcatcgattt
gacaacagcacagtgctcatagatccttatgcaaaactagttgaaggtcgccgatttttt
ggggatgctagcaataagtggtccaaatttctaggaacttatgattttgatagcttgcct
tttgattggggagacaattacaaggttccaagtatacctgagaaagatcttgttatatat
gagatgaatgttcgtgcatttacagctgataaatctagtggattggatccaaatgtccgt
ggcagctaccttggtgtgattgaaaagattccacacctgcttgatcttggaatcaatgca
gtggaattgctgcctgtttttgagtttgatgagttcgaatttcagaggcgcccaaaccct
agagatcacatgattaacacgtggggatattcaacaataaatttctttgctcctatgagt
cgctatgctagtgctggtggaggacctattaaagcttccagggagttaaaagaaatggtg
aaagccttgcatggtgctggaatagaggtcattttagatgttgtttataaccatactaat
gaggctgatgatgaaaacccttacaccacttcatttcgtggcatagataataaggtttat
tacatggtggacctaaacaatgaaggccagttgctgaacttctctggctgcggaaacaca
ctaaactgcaaccatcccatggtgatggaactcatacttgacagcttgagacactgggtc
attgagtatcatgtggatggatttcgatttgatctggctagcgttctttgtcgaggaaca
gatggttctccacttaatgctcccccaattattagggaaattgctaaagatgatatcctg
tcaaggtgtaaaattattgcagaaccttgggattgtggtggcctttaccttgttggaagg
tttccaaattgggatcggtgggctgaatggaatgggaagtaccgtgatgaccttagaaga
tttataaagggggacccaggtactaaggggaattttgccactcgtgttgctggatcttcc
gacctatacaaagtgaataagcgcaaaccataccacagtgtaaattttgttattgcacat
gatgggtttacattgtacgaccttgtgtcatacaattctaagcacaataatgctaatgga
gagggtggaaaggatggaactaatgataattttagctggaattgtggttttgaaggagaa
actgctgatgctaaaattaaagctttacgttcccggcaaatgaagaatttccacttggca
ttaatgtgttcccagggaacaccaatgatgctaatgggtgatgaatatgggcacactcgc
tatggaaataataacagttatggacacgatactgctattaatcattttctgtggggacag
ttggattcaaggaagagggatcgctttaggttttttaaagaggtgataaagtttcgccgc
atgcatcatgtttttggacgtgaaaattttcttgacaagaaagatgtgacatggcatgag
gacaactgggacaattatgagagcaaattccttgcattcacacttcatgcaaataatgga
ggagacatatatttggcattcaacactcatgacttctttgtcaaagttgcaataccctca
ccaccagcaaacaggcgttggttccgagtggtagacactaatctggagtctcccaaagat
tttgtctctgaaggtgtcccaggcattggaagcgcttacaatgtggctccttactcttca
attcttcttgaagcaaagctatga
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