Vitis riparia (riverbank grape): 117906072
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Entry
117906072 CDS
T07274
Name
(RefSeq) RING-H2 finger protein ATL11-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vri04121
]
117906072
Enzymes [BR:
vri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117906072
Ubiquitin system [BR:
vri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
117906072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
Prok-RING_1
zf-RING_16
zf-Nse
Zn_ribbon_IFT122_C
RINGv
Arc
zinc_ribbon_16
zf-RING_6
zf-RING_4
zf-RING-like
PHD
Prok-RING_4
RH_dom
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
117906072
NCBI-ProteinID:
XP_034674909
LinkDB
All DBs
Position
18:5066930..5068863
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AA seq
409 aa
AA seq
DB search
MTKETKFQRLSMFPIFNFNGVACLLNISLLLPLLSCATAQTAAEQPPPPSELMSLAQKFN
PSMAIVMIAIVSAFFFMGFFSVYLRQCIERRVRGRFNTEIVGIGGHRSWMAARGLNSSDV
ERFPTFVYSAVKAHKIGKEGLECAVCLNEFEDDETLRLLPKCNHVFHSDCIDLWLASHVT
CPVCRANLTPKPGEKFCAPVPIFGPETESDESDTRAEIVETPNQVPIAVDAQSPDVMNHG
RDTPNRPPRSRSIRARITGMFPRSHSTGHSLIQPGENRERFTLRLPEEIRNQIMNTSLSR
TKSWVALPGVQSSKRGYRANSVGSLRGKTYFNYEQFNGEVRAERLGFSMTPPFVPRTGSS
HARSPQGCEGSLTPKTLFRSLKSPFDRLFLPGGSVGERLSDRPRSDSPV
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaggaaaccaagtttcagcgcctttccatgtttccaattttcaatttcaatggc
gtcgcttgcctgctcaacatctctcttctgctgcccctgttatcctgcgcaaccgctcag
accgccgcagagcagccacccccgccctccgaactcatgtcgttagcgcagaagttcaac
ccctccatggctattgtaatgatcgccatcgtaagcgccttcttctttatggggtttttc
tcagtttacctccgccagtgtatcgaacgccgcgtccgcggacgattcaacacggaaatc
gttggaattggcggacatcgctcgtggatggcggctcgtggtctgaacagctcggatgtc
gagaggtttcccactttcgtatactcggcggtaaaggcgcacaagatagggaaagagggg
ctggaatgcgcggtgtgcctaaacgagttcgaagacgatgaaacgctgcgtttgctcccc
aagtgcaatcacgtgtttcactccgactgtatcgatctttggttggcctctcacgtcact
tgtcctgtttgtcgtgccaaccttactcccaaaccaggtgaaaaattctgcgctcccgta
cccatttttgggccggaaactgaatccgatgaatcggacaccagagcagagatcgttgag
acgccaaaccaagttccgattgccgtggacgcgcagtccccagatgtaatgaaccatggc
cgggacacgccgaatcgtccgccaagatcaagatcgataagggcacgaatcactggaatg
ttcccgcgttcgcactccactggtcattcgctgattcaaccgggtgagaatcgcgagagg
tttacgctcagattaccggaggagataaggaatcagatcatgaatacgagtttaagtcgt
acaaagagttgggtagcattgccgggtgtgcagagctcgaaaaggggatacagggccaat
agtgtgggaagtcttcggggaaagacctattttaactacgagcaattcaacggggaggtc
agggcggaacggttgggtttttccatgacgccacctttcgtcccaaggacaggttcctcc
cacgcccgctcgccccagggctgcgagggatctttgactcctaagactctcttcaggtcc
ctaaaatcccccttcgatcgtctttttcttccgggaggcagcgttggtgaacgcctatct
gatagaccccgctccgatagtcccgtttag
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