Vitis riparia (riverbank grape): 117906206
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Entry
117906206 CDS
T07274
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vri03041
]
117906206
Spliceosome [BR:
vri03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117906206
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RL
RRM_3
TGF_beta
Motif
Other DBs
NCBI-GeneID:
117906206
NCBI-ProteinID:
XP_034675073
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All DBs
Position
18:complement(24049624..24059180)
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AA seq
483 aa
AA seq
DB search
MYIHHPTLLSLPTPSLSHLPSAKAFSFCLQKDYSLLELFKMTEPSKVIHVRNVGHEISEN
DLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAANAMQFYTNVQPSIRGRNVYVQFSSH
QELTTVDQNAQGRGDEPNRILLVTIHHLLYPITVEVLHQVFSPHGFVEKIVTFQKSAGFQ
ALIQYQSRQSAVAARNSLQGRNIYDGCCQLDIQFSNLDELQVNYNNERSRDFTNPSLPSE
QKGRSSQSGYGDAGGMYALQPGARAVGFPQMPNASAIAAAFGGGLPPGISGTNDRCTVLV
SNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFG
KRLEVNFSKYSNITTGADTHEYMNSSLNRFNRNAAKNYRYCCSPTKMIHVSTLNQDITEE
EIVSHLEEHGTIVNTKLFEMNGKKQALVMFENEEQATEALVCKHATPLGGLAIRISFSQL
QGI
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgtatatacatcacccaacgcttttatcacttcctactccctctctctctcaccttcca
tcagccaaagctttctccttttgtcttcagaaggattattcattgttggagttatttaaa
atgacggagccttccaaagtcattcatgttcgtaatgtggggcatgaaatatcagagaat
gatttgcttcagctgttccagccatttggcgtcattactaagcttgtgatgcttcgtgca
aaaaatcaggctctcctccaaatgcaagatgttccctcagctgccaatgcaatgcaattc
tacacgaatgttcagccaagcataagggggaggaacgtctatgttcagttctcatcacat
caagaactaacaacagtggatcagaatgctcaaggacgaggagatgagcctaatcgaatt
ctcttagttacaattcatcacctgctataccctataacagtggaggtgctgcatcaagtg
ttttctcctcatggttttgtggagaagattgtcacgtttcagaagtcagctggttttcaa
gcccttatccagtatcaatcacgccagagtgcagttgcagcaaggaattctcttcaggga
cgcaatatttatgatggttgctgtcagcttgacattcaattttcaaaccttgatgagtta
caagtgaactacaataatgagcgctctagggacttcacaaatccatctctgccttcagag
cagaaaggcagatcttcacagtctggttatggtgatgcaggaggtatgtatgcccttcaa
ccaggagccagggcagttggatttccacagatgcccaatgcgtctgccattgctgctgcc
tttggaggaggtttgccccctggaattagtgggacaaatgacaggtgtactgtccttgtc
tctaatctaaatcctgatagaatagatgaagataagcttttcaacctgttctccatctat
ggaaacattgtcagaattaagctgctccgcaataagccagatcatgcactagtccaaatg
ggtgatggcttccaggctgagttggcagtacattttctgaagggagccatgctatttgga
aagagattggaggtgaacttctcgaagtattcaaacataactacaggtgctgatacacac
gagtatatgaactcaagtcttaaccgcttcaaccgtaatgctgcaaagaattaccgctac
tgctgttcccctacaaagatgatccatgtgtccactcttaaccaggacatcacggaggag
gagattgtgtctcacctggaggaacatggcaccattgtcaacaccaagctctttgagatg
aatgggaagaagcaggctctggtgatgtttgaaaatgaggagcaggcaactgaagctctt
gtgtgcaagcatgccaccccccttggtggattagcaatccgcatttccttttcccagttg
cagggtatatag
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