KEGG   Vitis riparia (riverbank grape): 117906370
Entry
117906370         CDS       T07274                                 
Name
(RefSeq) coatomer subunit beta'-2-like isoform X1
  KO
K17302  coatomer subunit beta'
Organism
vri  Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:vri00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:vri04131]
    117906370
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vri04147]
    117906370
Membrane trafficking [BR:vri04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    117906370
Exosome [BR:vri04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   117906370
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WDR55 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR75_1st EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_EIPR1 NBCH_WD40 Beta-prop_SPT8 WDR90_beta-prop_4th Beta-prop_HPS5 ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_DCAF4 PEP5_VPS11_N Beta-prop_Vps41 Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_WDR75_2nd Beta-prop_NUP159_NUP214 Beta-prop_WDR35_TULP_N Beta-prop_IP5PC_F Beta-prop_Nup120_160 WD_LRWD1 Utp8_b_propeller
Other DBs
NCBI-GeneID: 117906370
NCBI-ProteinID: XP_034675254
LinkDB
Position
18:29719312..29732449
AA seq 324 aa
MAPVLEIEKELVQQSERVKSVHLHPKEPWILASLYSGTVYIWNYHSQELVKSFKVAESPV
RSAKFIACKQWVVTGADDKFIRVFDYNTMEKIAEFEAHTDFIRSVAVHPTLPYVLSASDD
MLIKLWDWEKGWECTQTFQGHSDYVMQVAFSPKDANTFASASLDGTIKIWNLSSPAPDFT
LDGHSKGVNCIDYFMRGSKPYLISGSDDHTAKVWDYEAKSCVQTLEGHTNNVSAVCVHPE
LPLIITGSEDGNVHIWDGATYRLENTLNYGFERVWGFGCMKGSNRIVIGYDKGTIMVKVL
GSHIGVPWASGLRRKRKRNVDLCN
NT seq 975 nt   +upstreamnt  +downstreamnt
atggcccccgtattggaaattgagaaagaacttgttcaacaatcggaaagagtaaaatct
gtgcatctgcatccaaaggaaccatggattctagcaagtttgtattcaggaactgtgtat
atctggaactaccattcacaggaacttgtaaagtctttcaaggtcgccgaatcaccagtt
cggtcagcaaagtttatagcatgcaaacaatgggttgttactggggctgatgacaagttt
atccgagtcttcgactacaatacaatggagaagattgcagaatttgaggctcatactgat
ttcattaggagtgttgcagtccatcctacccttccatatgtgctgtcagcttctgatgac
atgctcataaagctttgggattgggagaagggttgggagtgcactcaaacgttccaggga
cattccgactatgtgatgcaagtggcatttagtcccaaagacgcaaacacttttgcaagt
gcttctcttgatggcaccataaagatttggaatctcagctcacctgcgccagactttaca
ctggatgggcattcaaaaggagtgaattgcattgattacttcatgagaggctcgaaacca
tatctgatctcgggttcggatgaccacactgctaaggtgtgggattatgaagccaagagt
tgtgtacaaacactggaaggccacacaaataatgtttctgcagtgtgtgttcaccctgaa
cttcccctcatcattacaggttctgaggatggaaatgttcacatatgggatggagctact
tacaggctggagaacaccctgaactatggttttgaaagagtttggggttttgggtgcatg
aaaggatcaaacaggattgtgattggctatgacaaaggaaccattatggtaaaagttctc
ggttctcacattggggttccatgggcatccgggttgaggaggaagagaaaaagaaatgtt
gatttgtgcaactaa

DBGET integrated database retrieval system