Vitis riparia (riverbank grape): 117906426
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Entry
117906426 CDS
T07274
Name
(RefSeq) cryptochrome-1 isoform X1
KO
K12118
cryptochrome 1
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
117906426
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Motif
Pfam:
FAD_binding_7
Cryptochrome_C
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
117906426
NCBI-ProteinID:
XP_034675333
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Position
18:4521773..4528512
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AA seq
681 aa
AA seq
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MSGGGCSIVWFRRDLRVEDNPALAAGVRAGAVIPVFIWAPEEEGPFYPGRVSRWWLKQSL
AHLDSSLRSLGTPLITKRSTDCVSSLLEIVKSTGATLLFFNHLYDPLSLVRDHRAKEALT
AQGIAVHSFNADLLYEPWDVNDAQGHSFTTFSAFWDRCLSMPYDPEAPLLPPKRINPGDV
SRCPSDTIAFEDESEKGSNALLARAWTPGWSNADKALTIFINGPLIEYSKNSRKADSATT
SFLSPHLHFGEVSVRKVFHLVRIKQVLWANEGNKAGEESVNLFLKSIGLREYSRYLSFNH
PYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWMHDRIRVVVSS
FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQFEGYKFD
PNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVEIDAAKARLQEA
LSEMWQAVAASRAAIENGTEEGLGDSESAPIAFPQDVQMEEIPEPVRNNPTTTAVRRYED
QMVPSMTSSFLRIEGEPSLDIQNSAENSRAEVPTNVNANQEPRRETLNRGVTHTVRSNNH
NLPQFNIMIGRNTAEDSTAESSSTTRRERDGGVVPVWSPSTSSYAEQFVSEENGIGTSSS
YLQRHPRSHQLMNWKQLSQTG
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaggtgggtgtagcattgtttggttcaggagagatctgagggttgaggataat
cctgcactagcagctggtgtgagagcaggggctgtgattcctgtgtttatatgggcacct
gaagaggaaggccccttttaccctgggagggtctcaagatggtggctcaagcagagtttg
gctcaccttgattcctctttgaggagccttggcactcctctcatcaccaagagatctact
gactgcgtttcttctctccttgagattgtcaaatctaccggagccactcttctcttcttc
aatcatttgtatgatcccttgtcacttgtcagggatcaccgggcaaaggaggctttaact
gctcaaggcatagctgtacattcctttaacgcggatttgctgtatgaaccatgggatgtt
aatgatgcccagggccactcattcacaaccttctcagctttctgggacagatgccttagc
atgccttatgaccctgaggcacctctccttcctcccaagaggattaacccaggtgacgtg
tcaaggtgcccctcagacacaattgcatttgaagatgaatctgagaagggtagcaatgca
cttcttgctcgagcatggacacctggatggagcaacgctgataaggccctaaccatattc
attaatggaccattaattgagtattctaagaatagtaggaaggctgatagtgctacaacc
tcatttctctctccccatttgcattttggggaggtgagtgtgaggaaagtattccatctt
gtccgcatcaagcaggtactgtgggccaacgaagggaacaaggctggtgaagagagtgtg
aacttgttccttaagtccattgggcttagggaatattcaagatacttgagttttaaccat
ccttacagtcatgaaaggccacttcttggacacctgaagttcttcccttgggttgttgat
gaaggctattttaaggcatggagacaaggtagaactggatatccattggtggatgctggc
atgagagagctatgggccaccggttggatgcatgatcggataagggttgtggtttctagt
ttttttgtgaaggttttgcagcttccatggcggtggggaatgaagtatttctgggataca
ctgttggatgcagatcttgagagtgatgctcttggttggcagtatatatctggtactctc
cctgatggccgtgagtttgatcgcatagacaatccacagtttgagggttacaaattcgac
cctaatggagaatatgtacgaaggtggctccctgaacttgctaggcttcctactgaatgg
atacaccacccatggaatgcaccagaatctgtactccaagctgctggaattgagttgggg
tcaaactaccctctccctattgtagagatagatgcagcaaaagccaggttgcaagaagca
ctttcagagatgtggcaagcagtagcagcttcaagagctgcaattgagaatggaaccgag
gagggccttggagactctgaatcagccccaattgcctttcctcaagacgtacaaatggag
gagattcctgagcctgtgaggaacaaccctaccactactgcagttagacgctatgaggat
cagatggttccaagcatgacttcttcttttctaaggattgaaggagaaccatctttggat
attcaaaattcagcagaaaatagcagagcagaagtcccaacaaatgttaatgcaaatcaa
gaaccaagaagggaaactcttaaccgaggggttacacacacagttcgaagcaacaaccac
aacctgccacaatttaatattatgatagggcggaatactgctgaagattccacagcagaa
tcttcaagcaccacaaggagagagagggatggaggtgtagttccagtttggtctccctca
acttctagttatgcagagcagtttgtgagtgaagagaatggcattggaaccagttcatct
tacttgcagaggcatccacggtctcaccagttaatgaattggaagcaactttctcaaact
gggtaa
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