Vitis riparia (riverbank grape): 117906463
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Entry
117906463 CDS
T07274
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
117906463
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vri04121
]
117906463
Ubiquitin system [BR:
vri04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
117906463
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Gene cluster
GFIT
Motif
Pfam:
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
117906463
NCBI-ProteinID:
XP_034675378
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Position
2:3391978..3394055
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AA seq
334 aa
AA seq
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MIQIRLSKRRQQDCDYSVEDDEPLHGRKYPAVTRDVHAVRFDREVSTLQVTPMKSNSPCA
QTFEEFEKEIKPAKQTSNDAGGKPPAVKRLRPSPERQATTAMPTQLSTGLNYATIQSPDL
IKLVTQCQNLQRLWVLDYIEDSGLDALAASCKDLQELRVFPSEPCDMEGNVALTEQGLVS
VSEGCPKLHSVLYFCRQMTNAALVSIAKNRPNMTRFRLCIIEPRTRDYQTLEPLDVGFGA
IVEHCKELHRLSLSSLLTDRVFEYIGTHAKKLEMLSVAFAGDGDLGLHHVLSGCKSLRKL
EIRDCPFGDQAPLANAAKQEYSTNVPVEYNSPVI
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgatacagattagattgagcaagagacgccaacaagattgcgactattcagtagaggat
gacgagcctttgcatggcagaaagtatcctgctgtaacacgtgacgtccatgccgtgagg
tttgaccgcgaggtttccactttgcaagtcacaccaatgaagtccaactccccgtgtgcc
cagacctttgaggaattcgagaaagaaataaagccagcaaagcagacctcgaacgacgcc
ggcggcaagccgccggcggtgaaacgcctccgcccatcaccggaacgccaagcaaccaca
gccatgcctactcaactgagcaccggcctgaactatgccactatccaaagtcctgatctc
atcaagctggtcacccagtgtcagaatttgcagcggctatgggtacttgattacattgaa
gacagtggcctagatgctctagctgcatcttgcaaagatctgcaagaactgagggtgttc
ccttctgaaccatgtgacatggagggaaatgtagccttgacagaacaagggctcgtctct
gtttctgaaggctgccctaagctccactctgtgctatacttctgtcgtcaaatgacaaat
gctgccttagtttccatcgccaaaaatcggccaaacatgactcgtttccgtctctgcatt
attgaaccccggactcgtgattaccaaaccctggagccacttgatgtgggttttggcgcc
attgttgagcactgtaaagaactacatcgcctttccctctctagtcttctcactgaccgg
gtgtttgagtacattggaacccatgccaagaagctagaaatgctatctgtggcttttgcc
ggagatggtgatttggggctccatcatgttctgtctgggtgcaaaagccttcggaagtta
gagatcagggattgtccctttggggaccaggctcccttggccaatgctgcaaagcaagag
tactcaacaaatgtcccagttgaatacaacagcccggtgatataa
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