KEGG   Vitis riparia (riverbank grape): 117906510
Entry
117906510         CDS       T07274                                 
Name
(RefSeq) tubulin alpha-4 chain
  KO
K07374  tubulin alpha
Organism
vri  Vitis riparia (riverbank grape)
Pathway
vri04145  Phagosome
vri04517  IgSF CAM signaling
vri04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:vri00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    117906510
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    117906510
  09142 Cell motility
   04814 Motor proteins
    117906510
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vri03019]
    117906510
   03036 Chromosome and associated proteins [BR:vri03036]
    117906510
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:vri04812]
    117906510
   04147 Exosome [BR:vri04147]
    117906510
Messenger RNA biogenesis [BR:vri03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     117906510
Chromosome and associated proteins [BR:vri03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     117906510
Cytoskeleton proteins [BR:vri04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    117906510
Exosome [BR:vri04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117906510
  Exosomal proteins of other body fluids (saliva and urine)
   117906510
  Exosomal proteins of colorectal cancer cells
   117906510
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281 DUF8666
Other DBs
NCBI-GeneID: 117906510
NCBI-ProteinID: XP_034675437
LinkDB
Position
18:6729975..6732780
AA seq 451 aa
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA
SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP
TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDNKFDLMYSKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAESAEGDEGDEGDEY
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgagagagtgcatttccattcacattggtcaggccggtattcaggtcggcaatgcgtgc
tgggaactttactgcctcgagcatggcattcagcctgatggccagatgccaagtgataag
actgttggcggaggagatgatgcatttaacacctttttcagtgaaactggtgctgggaag
catgtccctcgtgccgtttttgtagatctcgagcccactgtgattgatgaagtgaggact
ggagcataccgacagctcttccacccagaacaactcatcagtggcaaggaggatgccgct
aacaactttgcccgtggccattacaccattgggaaagagatcgttgacctctgtttggac
cgtatcagaaagcttgccgacaactgcactggtcttcagggtttcctggtcttcaatgct
gttggaggtggcactggttctggccttgggtctcttttgttggagcgactatctgttgac
tacggcaaaaagtcaaagcttggattcactgtttacccctcccctcaggtttcaacatct
gttgttgagccctataacagtgtcctttcaacccactccctgcttgagcacactgatgta
gctgtgcttctggacaatgaagcaatctatgacatttgcaggcgatcccttgacattgag
cgcccaacctacaccaatcttaatcgcctggtctctcaagttatttcatcactcactgcc
tcattgaggtttgatggagccttaaatgtggatgtgactgaattccagaccaacctggtt
ccttacccaaggattcactttatgctttcttcatatgcccccgtcatttccgctgagaag
gcatatcatgagcagctctctgtggcggagatcaccaacagtgcctttgagccctcgtct
atgatggccaaatgtgacccacgccatggcaagtacatggcatgctgcctgatgtaccga
ggtgatgtagtgcccaaggacgtgaatgcagctgtagccaccatcaagaccaagcgcact
atccagtttgttgattggtgccctactggattcaagtgtggtatcaactaccagccacca
actgttgttccaggaggtgacctagccaaggtgcagagggctgtatgcatgatctctaac
tcaaccagtgttgctgaagtgttctctcgcattgacaacaaatttgatcttatgtattct
aagcgtgcttttgtccactggtatgttggtgagggcatggaggaaggagagttctctgaa
gctcgtgaggatcttgctgccctggagaaggattatgaggaagttggtgcagagtctgct
gagggggatgaaggtgacgaaggagatgaatattga

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