KEGG   Vitis riparia (riverbank grape): 117906511
Entry
117906511         CDS       T07274                                 
Name
(RefSeq) serine hydroxymethyltransferase 7
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
vri  Vitis riparia (riverbank grape)
Pathway
vri00260  Glycine, serine and threonine metabolism
vri00460  Cyanoamino acid metabolism
vri00630  Glyoxylate and dicarboxylate metabolism
vri00670  One carbon pool by folate
vri01100  Metabolic pathways
vri01110  Biosynthesis of secondary metabolites
vri01200  Carbon metabolism
vri01230  Biosynthesis of amino acids
vri01240  Biosynthesis of cofactors
vri04981  Folate transport and metabolism
Module
vri_M00532  Photorespiration
Brite
KEGG Orthology (KO) [BR:vri00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    117906511
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    117906511
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    117906511
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    117906511
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    117906511
Enzymes [BR:vri01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     117906511
SSDB
Motif
Pfam: SHMT Aminotran_5 Beta_elim_lyase DegT_DnrJ_EryC1
Other DBs
NCBI-GeneID: 117906511
NCBI-ProteinID: XP_034675438
LinkDB
Position
18:3834891..3841154
AA seq 584 aa
MDASHAQSGLSLGFHSHSSLAPMTPLADDSVKLQIASDFSSLGNPIQSVPLQLFEQRCEK
FSNGSGGQSEDGEDEEFHILGHPMCLKRPRDEQFSRSSSPSKMALVESGLEQRRVAVRAW
GNQPLSVADPDVFQMMEKEKKRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGMPGAR
YYTGNDYIDQIELLCCRRALAAFHLDSEKWGVNVQPYSCTSANFAVYTGLLLPKDRVMGL
DSPSGGHLSHGYYMPSGKKVSGTSIFFESLPYKVNPQTGYIDYDKLEEKALDFRPKILIC
GGSSYPREWNYARFRQIADKCGAVLMCDMAQISGIVAAKECASPFDYCDIVTSTTHKNLR
GPRGGIIFYRKGAKARKPGMLLSQGDDSNQYDFEERINFAVFPSLQGGPHNNHIAALAIA
LKQVATPEYKAYMQQVKKNAQALAAALLRKSCKLVTEGTDNHLLLWDLTDLHITGKNYEK
VCEMCHITLNKTAIYGDNGAISPGGVRIGSPAMTTRGCLEADFETIADFLYRAAVITSAV
VTQRELRKFPRDFFKCLQNNKDIVELRNQVETFASQFAMPGFDI
NT seq 1755 nt   +upstreamnt  +downstreamnt
atggatgcgtctcatgctcagtcgggtctctctctagggtttcattcgcattcatcgcta
gctcccatgacgccgctcgctgacgattcggtgaagctgcagattgcttcggattttagc
agtctggggaatcctattcaatccgttccactgcaattgtttgagcaaagatgcgagaaa
ttttctaatggaagtggaggacagtctgaagacggagaggatgaggagtttcatattttg
gggcatcccatgtgtttgaagaggccgagagacgagcaattttcgaggtcttctagccct
tctaagatggctttggttgagtccgggcttgagcagaggcgagtagcggtgagggcttgg
ggaaaccagccgcttagtgttgctgatcctgatgttttccaaatgatggagaaggagaag
aagaggcagtttaaaggaattgagcttatagcttctgagaattttgtgtgtagggctgtg
atggaagcccttgggagtcatttgacaaacaaatattcagaaggaatgccaggtgcaaga
tattacacgggtaatgactacattgatcagattgaattactttgctgcaggcgtgccttg
gcggcttttcatcttgattctgagaaatggggtgtaaatgtccagccatattcgtgtaca
tcagctaattttgctgtgtacactgggcttttacttcccaaggatcgggttatgggtttg
gattcgccctctggtggtcatctgagtcatgggtattacatgccaagcgggaaaaaggtt
tcaggtacatcaatattttttgagagtctcccttataaagtgaacccacaaactgggtat
attgattatgataaacttgaggagaaggctcttgatttccgtcccaagatacttatttgt
ggtgggagttcatatccacgggagtggaattacgcaaggttcaggcagattgcagataaa
tgtggcgcagtattaatgtgtgacatggctcagattagcggtattgtggcggctaaggag
tgtgcaagtccgtttgattattgtgatattgttacctcgacaactcacaaaaatctccga
ggtcctaggggaggtattattttttacagaaaaggtgcaaaggcaaggaagcctggcatg
ctgcttagccaaggagatgatagtaaccaatatgattttgaggagaggataaactttgct
gtcttcccttcattacaagggggccctcacaataatcacatagctgctcttgccatagcc
ttaaaacaagtggccacaccagagtacaaagcatatatgcaacaggtgaaaaaaaatgct
caggctttagcagctgctttgctcagaaaaagttgcaaattggtgacagaaggtactgac
aaccatttgttgctctgggatcttacagatctacacataacaggcaagaactatgagaag
gtctgtgagatgtgccacattactctcaataaaactgctatatatggtgacaatggtgcc
atttcccctggaggggtaaggatcggttctcctgccatgacaacaagaggttgtctggag
gctgattttgagacaattgcggactttctctacagagctgctgtgattacaagtgcagtt
gttacacaaagagaacttagaaagtttccgcgagattttttcaagtgtctccagaacaac
aaggatattgttgagctccgaaatcaagttgagacatttgcttcccagtttgcaatgcca
gggtttgacatttga

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