Vitis riparia (riverbank grape): 117906520
Help
Entry
117906520 CDS
T07274
Name
(RefSeq) transcription initiation factor TFIID subunit 4b-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117906520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vri03021
]
117906520
03036 Chromosome and associated proteins [BR:
vri03036
]
117906520
Transcription machinery [BR:
vri03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117906520
Coactivators
SAGA/TFTC/STAGA complex
117906520
Chromosome and associated proteins [BR:
vri03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
117906520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
Motif
Other DBs
NCBI-GeneID:
117906520
NCBI-ProteinID:
XP_034675449
LinkDB
All DBs
Position
18:7826842..7840289
Genome browser
AA seq
988 aa
AA seq
DB search
MDPSIMKLLEEDEDETMHSGADVEALTAALNRDIEGDTSTSQPSDSENVLSQGSNHTSSQ
LFSQWQTSSQDENTDSQSQQELKSLQQQELNSSDLEQKQHGSGVENQQQVDASHDINRLP
LQQKQSQDDPQQLQAEPNPIQFSQAPGIQISEKNSVQIPEPDRIHNPDKQHQFPELQKIN
NQQGIATEQASNSGNQNKHIPFGMLLPSIIPHLDKDRALQLRTLYAKLKKNEIPKLAFVR
LMRGIVGDQMLKLAVMKLQQSPTGPSQFQSQSQASALQQHLKTPSSIGSQFSDPHSFSQL
HQKSQSTPADSSHMPSSAMKVQTDSSYPTNETNSQKPREMERQSDSHGMQGSQMSSSSLS
SAKQEREHSVMPMQGPNKQQLQKQQQQQQHQQQQQQQHQQQQQQQQQQQQQQQQPQQQKQ
HLHFSQTPFTMYGSAGGNYHSYTGTNVNTSATSTKQQPHDSQMRQVSLHQNIGSTQMGGT
SQAMNPMSVPKFERQSSVNDPKRVQGGSLPHPSNSSTLQQSSVPWQSSTNKEQISSMAYV
KQEPADQTNEQQQKSQLSTPQSLSSFPAVQVEKGNAIPGILKDESLEKQASRIGFSSSMS
MLPPNSVSSSMGTHLDPNVPLGSRIPSVTSPVGINTRTPPKKPSIGQKKPLEALGSSPPL
PSKKQKVSGAFLDQSIEQLNDVTAVSGVNLREEEEQLFSGPKEDSRVSEASRRVVQEEEE
RLILQKAPLQKKLAEIMARCSLKNISNDVERCLSLCVEERLRGFISNLIRLSKQRADVEK
PRHRSIITSDIRQQILIMNHKAREEWEKKQAEAEKLRKLNEPEGSTGVDGDKDKDEGRVK
LLKANKEEDDKMRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGIDAASGSQPGKD
PSRKPSSTSGRNVRENQEAEKRGYSTVVSSSGGVRKFGRNNAMVPQTRVARNITVKDVIS
VLEREPQMLKSTLIYRLYEKMRTGAATE
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggatccatccatcatgaagctcctcgaagaagacgaggatgaaacaatgcattctggt
gctgatgtggaggcactcactgctgccttaaacagagacatagaaggagatacctcaact
tctcagccttcagattctgaaaatgttttgtctcaaggaagcaatcacacttccagtcag
ttgttttcacagtggcaaacatccagccaagatgaaaacacggactctcaaagtcaacaa
gagctaaagagtttgcagcagcaagagctaaactcatctgacttggagcaaaagcagcat
ggatctggtgttgagaatcagcaacaagttgatgcctcacatgacataaatcgcctccct
ttgcaacagaaacaatcccaagatgatcctcaacagctgcaggcagaaccaaatcccata
cagttttctcaagcacctgggatacagatttcagaaaagaattctgtccagattccagag
ccagacagaattcataatccagataaacagcatcaattcccagaattacagaagataaat
aatcaacagggaatagccactgagcaggcaagtaactcggggaatcaaaataaacatata
ccatttggaatgttgcttccatctataatacctcatctggataaagacagagccttgcaa
cttcgaactctttatgctaaactgaagaaaaatgaaatccccaaactagcattcgtcagg
cttatgagaggtatcgtaggagaccagatgctcaagttggcagtaatgaaactgcaacaa
tcaccgaccggacccagccaattccaatcacagtctcaagcttcagcgctgcaacaacat
ttgaaaacaccatccagtattggctcacagttctctgatcctcattcattttcacaactt
catcagaagagccagagcactcctgcagactcatctcatatgccctcttcagccatgaaa
gtgcagactgattcaagctatccaaccaatgaaaccaattctcaaaaaccccgggagatg
gaacgtcagtcagattcacatggaatgcaagggagccaaatgtcttcttccagcttgagt
tctgccaaacaagaaagggagcactctgtgatgccaatgcaaggtcctaacaagcagcag
ctacagaaacagcaacagcaacagcagcaccaacagcaacagcaacagcagcaccaacag
caacagcaacagcagcagcaacaacaacaacagcagcagcagcctcagcaacagaagcag
catctgcacttttcacagacaccttttactatgtatgggagtgctggtggtaattatcac
tcatatacaggcactaatgttaatacttcagcaacatctacaaaacagcaacctcatgat
tcccaaatgaggcaagtgtctcttcaccaaaacattggttcaactcagatgggagggaca
agtcaagccatgaatccgatgagtgtgcccaaatttgagaggcagagttctgttaatgat
cccaagagagtgcagggtggatctcttcctcatccatcaaacagttcgacattgcaacag
agttctgtcccttggcaatcatcaacaaataaagagcagatctcatcaatggcttatgta
aagcaggaaccagctgatcaaactaatgagcagcagcaaaaatcccagctgtctacccca
cagagtttgtcttctttccctgctgtacaggttgaaaagggaaatgccattccaggaatt
ttaaaagatgaatctttggagaagcaggcttctagaattggtttctcatcatctatgagt
atgttgcctccaaattcagtttcatcttccatggggacacatctggacccaaatgtcccg
ctaggctcccgaatcccatctgttacttctcctgttggaattaatacaaggacaccccca
aaaaaaccttctattggccagaagaaaccacttgaagcacttggttcttcaccgcctctg
ccaagtaaaaagcaaaaggtatctggagcctttctggatcaaagcattgaacaactgaat
gatgttactgctgtcagtggagttaacctgagggaagaagaagagcagttattttccggg
cccaaggaggacagtcgagtctcagaagcatctcgaagggttgtgcaagaagaagaagaa
aggctaattttgcagaaagctcctcttcaaaaaaaattagcagaaatcatggctagatgc
agtttaaagaatataagcaatgacgtggagcgatgcttatcattgtgtgttgaagaaaga
ttgcgtggatttataagtaatttaatcagactgtcaaaacagcgagctgatgttgagaaa
ccaagacatcggagtattattacctcagatattcgacaacaaatcttgataatgaaccat
aaggccagggaggaatgggagaaaaagcaggctgaagcagaaaagcttcgtaaactcaat
gagcctgagggtagtactggggttgatggtgacaaggacaaggatgaaggtcgtgtaaaa
ttactcaaggcaaacaaagaggaggacgacaaaatgaggacaacagctgcaaatgttgct
gctcgagctgctgttggaggagatgacatgttgtccaaatggcaacttatggctgagcaa
gctcgccagaaacgtgaaggaggaattgatgcagcctctggttctcaacctggtaaagat
ccaagccgcaagccgtcttcaacctctggaagaaatgtaagggaaaatcaagaagcagaa
aaaaggggctactcaactgttgtttcttcatctggtggtgttagaaaatttggaaggaac
aatgccatggtgccccaaactagggtagctcgtaatatcactgttaaggatgtcatttca
gtattggaaagggaaccacaaatgttgaaatctactctgatatatcgcttgtacgaaaaa
atgcgcactggtgccgcaactgaataa
DBGET
integrated database retrieval system
