KEGG   Vitis riparia (riverbank grape): 117906730
Entry
117906730         CDS       T07274                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
vri  Vitis riparia (riverbank grape)
Pathway
vri03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vri00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117906730
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vri03041]
    117906730
Spliceosome [BR:vri03041]
 Complex A
  U2 snRNP components
   U2 related factors
    117906730
 Complex B
    117906730
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_DUS3L RBD_AKAP-17A zf-CCCH_4
Other DBs
NCBI-GeneID: 117906730
NCBI-ProteinID: XP_034675788
LinkDB
Position
18:426230..431546
AA seq 272 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
GVDAQGQPIDPRKIQEHFEDFYEDIFEELGKFGEIESLNVCDNLADHMIGNVYVQFKEEE
QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL
RRKLFGRYSGYGRSRSRSRSLSPRYRRDSDRRRSGDRGDYRGNGRRSEDKHGSDGGRRRH
GSPRRSRSLVREGSEERRARIELWNREREERQ
NT seq 819 nt   +upstreamnt  +downstreamnt
atggcggagcacttggcttccatctttggcaccgaaaaggaccgcgtgaactgtccgttc
tatttcaagatcggtgcttgtcgtcacggagatcgatgctcgcgcctccacaatcgcccc
acgatctccccaacgcttctcctctccaacatgtatcagcgtcccgacatgattactcca
ggtgtagacgctcaaggccagcctattgatcccaggaagattcaggaacactttgaggac
ttctacgaggatatctttgaagagctcggcaagttcggcgagatcgagagtctcaatgtt
tgtgataacctggccgatcacatgatcggtaatgtttatgttcagttcaaggaggaggag
caggcggccgctgctttgcaagctttgcaggggcggttctactccggccgccctatcatt
gcggatttttctcccgttaccgactttcgcgaagcaacgtgtcgccaatttgaggagaac
aattgcaaccgagggggttactgtaattttatgcatgtgaagcttattggaagggatttg
aggaggaagctatttgggaggtacagcggatatgggagaagtcgaagccggagcaggagt
ttgagtccacgttaccggagggattctgataggcgaaggagcggggaccgtggagattac
cgaggaaatgggcgacggagcgaggataagcacgggagtgatgggggtcgaagaagacat
ggcagtcccaggcggagcaggagtctggtgagagaagggagtgaggagcgcagagcgagg
attgagctgtggaatcgagaaagagaggaaaggcagtga

DBGET integrated database retrieval system