KEGG   Vitis riparia (riverbank grape): 117906813
Entry
117906813         CDS       T07274                                 
Name
(RefSeq) SWI/SNF complex subunit SWI3C
  KO
K11649  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
vri  Vitis riparia (riverbank grape)
Pathway
vri03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:vri00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    117906813
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vri03021]
    117906813
   03036 Chromosome and associated proteins [BR:vri03036]
    117906813
Transcription machinery [BR:vri03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     117906813
Chromosome and associated proteins [BR:vri03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    117906813
   PBAF complex
    117906813
   GBAF(ncBAF) complex
    117906813
SSDB
Motif
Pfam: SWIRM-assoc_1 SWIRM Myb_DNA-binding Myb_DNA-bind_6 ZZ
Other DBs
NCBI-GeneID: 117906813
NCBI-ProteinID: XP_034675918
LinkDB
Position
18:complement(2532782..2550672)
AA seq 794 aa
MPASPSDARTKWRKRKRDPHVSRRQKHEEDEEDDDDVDDELDADADDDNEQQPQHGPQSG
AVPDPAPLMREVLSDGAVRISDFPSVVKHTVNRPHSSVLAIVGTERAIQFGDTRNQQSPM
FLENISHGQLQALSAVPADSPSLATSDQERSDGGGYVVAPPQIMEGRGVIKRFWNGRVHA
VPMHSDWFSPNTVHRLERQVVPHFFSGKSPDHTAELYMECRNLIVAKYMEYPEKRLSVSD
CKGLVAGIQEEDLTRIVRFLDHWGIINYCASSVPNREPWSSTSYLREDSNGEVHVPSAAL
KSIDSLIKFDKPKCRLKAAEVYSSLSCNGDEDSDLDCKIRERLSDNRCNYCSRPLPIGYY
QSQKEVDVMLCTDCFYEGRFVTGHSSIDFIRLDSTKDYGDVDSESWSDQETLLLLEAMES
YNENWNDIAEHVGTKSKAQCILHFIRMPMEDGLLENIEVPSMPTLSNSLNKVDQERSHSN
SNGNLAGSCLPGLDSYSRLPFANSGNPVMSMVAFLATAVGPRVAAACAHASLIALSEENA
LAAASGFIIPPEGSGHGNRMKEGGPHGELTNSSQHQDGNIAIQGSWGQNDAEVASLPVEK
VRAAAKAGLAAAAMKAKLFADHEEREIQRLSANIINHQLKRLELKLKQFAEVETLLMKEC
EQVERARQRFAAERARIISTRFGPTGVTSPMNLPGVAPALVSNNTGNNRQQIISASPSQP
SISGYGNNQQMHPHMSFMPRQPMFSFGPRLPLAAIQPSSSTPSPNAMFNNSGSSQPTLNH
PMMRPVSGTSSGLG
NT seq 2385 nt   +upstreamnt  +downstreamnt
atgccagcttctccctctgacgctcgcaccaaatggagaaagaggaagcgagacccccat
gtctcccgccgtcagaagcatgaggaggacgaggaagatgatgacgacgtcgacgacgaa
ttggacgccgacgcggatgacgacaacgagcaacagcctcagcatggtccgcagtccggc
gccgtacccgatcctgcccctttgatgagggaggtgctttccgatggcgccgttcgaatt
tccgacttccctagcgtggtgaagcacaccgtgaatcgtccacactcgtccgtgctagcc
attgttgggacggagcgggcgattcagtttggggacactaggaatcagcaaagccccatg
tttttggagaatatatcacatgggcagctccaggcgttgtccgccgtgccggcggatagt
ccgtctttggcgacgtcggatcaggagagatcggatggaggtggttacgtggtggcgcca
ccgcagatcatggaggggcgtggtgtgattaagcggttttggaatggtcgggttcatgct
gttccaatgcactcagattggttttcgcctaacacagtgcacagattggagagacaagtg
gttccgcattttttctctggaaagtctccagaccatacggcagagctatacatggaatgc
aggaacttgattgttgccaagtacatggaatatccagagaaaagattatcggtttctgac
tgtaagggccttgtggctggcattcaggaggaagacttgacccgaattgttcgtttcctg
gatcactggggaatcattaattactgtgcttcttctgtgccaaatcgtgagccttggagt
agcacatcctacctaagggaggattcgaatggtgaggttcatgtgccatcggctgctttg
aagtccattgatagtttgatcaaattcgacaagcccaaatgtaggctcaaggcggctgag
gtgtactcatccttgtcatgtaacggtgacgaggactccgacttggactgcaaaattcga
gagaggttatctgataatcgttgcaattattgctctcgacctcttccaattgggtattat
caatcacagaaggaggtcgatgtaatgctatgcacagattgcttctatgaagggaggttt
gtaactggtcattcaagtatagattttatacggttggattccacaaaagattatggtgac
gttgatagcgaaagttggagtgatcaggagactttactcctgcttgaagcaatggaatct
tataatgagaactggaatgacattgcagagcatgttggtaccaagtcaaaagcacaatgc
atccttcattttattcgtatgcccatggaggatggcctacttgagaatattgaagttcca
agcatgccaactttatctaattctttgaataaagttgatcaggaaagatcacattcaaat
tcaaatgggaatttagcaggatcttgtctccctggccttgattcttatagtaggctccct
tttgcaaattctggaaatccagttatgtccatggttgcctttctagccaccgctgttgga
ccacgagttgccgcagcctgtgcccatgcatccttgatagcattgtctgaggaaaacgct
ttagctgctgcttctggattcatcataccgccggaaggatctggacatggaaataggatg
aaagaaggtggtccacatggagagctgacaaattcaagtcagcaccaagatggaaacata
gcaatacaaggttcatggggtcaaaatgatgcagaggttgcttcattacctgttgaaaaa
gttagagctgctgcaaaagctggtcttgctgctgcagcgatgaaggcaaaactgtttgct
gatcatgaagaaagggaaattcagaggctttctgccaatattattaatcatcagttgaag
agattagagctgaagctgaagcaatttgcagaagtggaaaccttgttgatgaaagaatgt
gaacaggtggagagggcaagacaaaggtttgcggctgagcgagcccgcattatatcgacc
cggtttggaccaaccggagtcacttcacctatgaatcttccaggtgttgctcctgctttg
gttagtaacaacactggcaacaataggcaacaaatcatatcagcctcaccttcacagcca
agcatttctgggtacggtaataaccaacaaatgcatccacacatgtcgttcatgccgcgg
cagccaatgttttcatttggaccacgcctgccccttgcagccatacagccatcctcatca
actccttctccaaatgccatgtttaacaattcgggtagttcacagcctactctcaatcat
ccaatgatgaggcctgtatcagggactagctctggtttaggttga

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