KEGG   Vitis riparia (riverbank grape): 117906844
Entry
117906844         CDS       T07274                                 
Name
(RefSeq) F-box protein SKP2B
  KO
K03875  F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
vri  Vitis riparia (riverbank grape)
Pathway
vri04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:vri00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    117906844
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:vri04121]
    117906844
Ubiquitin system [BR:vri04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     117906844
SSDB
Motif
Pfam: DUF7885 LRR_6 LRR_4 LRR_At5g56370 F-box-like LRR_Zer-1 F-box LRR_8 LRR_At1g61320_AtMIF1
Other DBs
NCBI-GeneID: 117906844
NCBI-ProteinID: XP_034675973
LinkDB
Position
18:13279527..13282930
AA seq 370 aa
MEMVGQGGEELEFCFERLVMGGDGRGGMDGGGVGVITEWKDVPMELLLRIVALVDDRTVI
MASGVCSGWRDAICLGLTHLSLSWCKNNMNNLVLSLAPKFTKLQALTLRQDKPQLEDKAV
EIIANYCHDLQDLDLSKSFKLSDSSLYALAHGCPNLTKLNISGCTAFSDAALAHLTSFCR
KLKILNLCGCGKAASNRALQAIGRNCSQLQSLNLGWCEDVSDAGVMSLAYGCPDLRALDL
CGCVRITDESVIALANRCLHLRSLGLYFCQNITDKAMYSLAQSRVKNKHEMWESMKSRYS
EEGLMNLNISQCTALTPPAVQAVCDSFPALHTCPGRHSLIISGCLSLTSVHCACGVQAHR
TASQLSHPAH
NT seq 1113 nt   +upstreamnt  +downstreamnt
atggaaatggtgggacaaggaggtgaggagctggagttctgctttgagaggcttgtgatg
ggtggggacggaagaggggggatggacggaggcggtgtcggggtcattactgagtggaag
gatgtccctatggagcttctgctgcggattgttgcgctcgtcgatgatcggacagtgatt
atggcttctggggtgtgcagtggatggagagatgctatttgcttgggccttacccatctc
tccctttcttggtgcaaaaacaacatgaacaacttggttctatcgcttgctcccaaattc
acaaaattgcaggctctaacactgcgtcaagataaaccacagctggaggataaagctgtg
gagattattgcaaattattgccatgatctgcaggatttggatctcagtaaaagcttcaag
cttagtgattcctccctttatgccttggctcatggttgtcctaatcttactaaacttaac
atcagtggatgtacggcattcagtgatgctgctcttgcacatctgaccagtttctgcaga
aaattaaaaattttaaatctttgtggatgtgggaaagctgcatctaatagggcattgcag
gctattggacggaactgcagtcagctgcaatctttgaatctggggtggtgtgaggatgtg
agtgatgctggagtgatgagtttagcatatggatgccctgatctcagggcgcttgacttg
tgtggttgtgttcgtattacagatgagagcgtaattgctttggcaaacaggtgccttcat
ctgagatcccttggcctgtacttctgtcagaacattacagacaaagcaatgtattccctg
gcccagagccgtgtaaagaacaagcatgaaatgtgggaatccatgaagagcaggtacagc
gaggaagggcttatgaatctcaatatcagccagtgcacagccctcacacctcctgctgtt
caagctgtatgtgattcatttcctgcacttcacacttgtccaggaaggcattcgctcatc
ataagtggctgtttgagcttaacatcggtgcattgtgcctgtggtgtccaagcacaccgc
acagccagccagctttcacacccagctcattaa

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