Vitis riparia (riverbank grape): 117906844
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Entry
117906844 CDS
T07274
Name
(RefSeq) F-box protein SKP2B
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117906844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vri04121
]
117906844
Ubiquitin system [BR:
vri04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
117906844
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GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
LRR_At5g56370
F-box-like
LRR_Zer-1
F-box
LRR_8
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
117906844
NCBI-ProteinID:
XP_034675973
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Position
18:13279527..13282930
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AA seq
370 aa
AA seq
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MEMVGQGGEELEFCFERLVMGGDGRGGMDGGGVGVITEWKDVPMELLLRIVALVDDRTVI
MASGVCSGWRDAICLGLTHLSLSWCKNNMNNLVLSLAPKFTKLQALTLRQDKPQLEDKAV
EIIANYCHDLQDLDLSKSFKLSDSSLYALAHGCPNLTKLNISGCTAFSDAALAHLTSFCR
KLKILNLCGCGKAASNRALQAIGRNCSQLQSLNLGWCEDVSDAGVMSLAYGCPDLRALDL
CGCVRITDESVIALANRCLHLRSLGLYFCQNITDKAMYSLAQSRVKNKHEMWESMKSRYS
EEGLMNLNISQCTALTPPAVQAVCDSFPALHTCPGRHSLIISGCLSLTSVHCACGVQAHR
TASQLSHPAH
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgggacaaggaggtgaggagctggagttctgctttgagaggcttgtgatg
ggtggggacggaagaggggggatggacggaggcggtgtcggggtcattactgagtggaag
gatgtccctatggagcttctgctgcggattgttgcgctcgtcgatgatcggacagtgatt
atggcttctggggtgtgcagtggatggagagatgctatttgcttgggccttacccatctc
tccctttcttggtgcaaaaacaacatgaacaacttggttctatcgcttgctcccaaattc
acaaaattgcaggctctaacactgcgtcaagataaaccacagctggaggataaagctgtg
gagattattgcaaattattgccatgatctgcaggatttggatctcagtaaaagcttcaag
cttagtgattcctccctttatgccttggctcatggttgtcctaatcttactaaacttaac
atcagtggatgtacggcattcagtgatgctgctcttgcacatctgaccagtttctgcaga
aaattaaaaattttaaatctttgtggatgtgggaaagctgcatctaatagggcattgcag
gctattggacggaactgcagtcagctgcaatctttgaatctggggtggtgtgaggatgtg
agtgatgctggagtgatgagtttagcatatggatgccctgatctcagggcgcttgacttg
tgtggttgtgttcgtattacagatgagagcgtaattgctttggcaaacaggtgccttcat
ctgagatcccttggcctgtacttctgtcagaacattacagacaaagcaatgtattccctg
gcccagagccgtgtaaagaacaagcatgaaatgtgggaatccatgaagagcaggtacagc
gaggaagggcttatgaatctcaatatcagccagtgcacagccctcacacctcctgctgtt
caagctgtatgtgattcatttcctgcacttcacacttgtccaggaaggcattcgctcatc
ataagtggctgtttgagcttaacatcggtgcattgtgcctgtggtgtccaagcacaccgc
acagccagccagctttcacacccagctcattaa
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