Vitis riparia (riverbank grape): 117906981
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Entry
117906981 CDS
T07274
Name
(RefSeq) deoxyribodipyrimidine photo-lyase isoform X1
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vri03400
]
117906981
Enzymes [BR:
vri01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
117906981
DNA repair and recombination proteins [BR:
vri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
117906981
Prokaryotic type
117906981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
117906981
NCBI-ProteinID:
XP_034676175
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All DBs
Position
2:complement(15043742..15051710)
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AA seq
497 aa
AA seq
DB search
MASPSSALNKSSMVQQGRIRVLKEGSTPSGRDAGPVVYWMFRDQRLRDNWALIHAVDQAN
KANVPVAIAFNLFDQFLGAKARQLGFMLRGLRLLHRDLEQTLQIPFFLFQGEAIETIPNF
LREYGASLLVTDFSPLREVQKWKEEICKRVGKKVSLHEVDAHNIVPTWVASEKLEYSART
IRGKINKLLPEYLIDFPTLQPPSVKWAGTNQSIDWDDLITEVLREGAEVPEIKWCESGEN
AAVEILMGSKNGFLTKRLKNYSTDRNNPLKPGALSGLSPYLHFGQISAQRCALEAKKIQK
NCPQAVDVFLEELIVRRELADNFCFYQPRYNSLQGAWEWARKTLMDHASDKREHIYTKEQ
LENAQTADPLWNASQLEMVHYGKMHGFMRMYWAKKILEWTRGPEEALAISIYLNDKYEID
GRDPNGYVGCMWSICGVHDQGWQERQIFGKIRYMNYAGCKRKFDVDGYIAYVKRLVTETK
KRKAESSLGKEAKELRV
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggcctctccatcttcagcccttaacaaatcgtccatggttcaacagggaagaatcagg
gttttgaaggaaggatccacgccgtctggtcgagatgcgggtcccgtagtctactggatg
tttagagatcaacggttgagagacaactgggcattgatccacgccgttgatcaggccaac
aaagccaatgttcctgtggctatagccttcaatctgttcgatcagttcttgggggccaaa
gctcggcagttagggtttatgttgagaggtttgcgacttctccatcgtgatctcgaacaa
actcttcagattccgtttttcttgtttcagggggaagctatagaaactattcccaatttt
cttagggaatatggagcttcacttcttgtaacggacttctcacctttacgtgaagttcag
aaatggaaagaggaaatttgcaagagggtggggaaaaaagtgtccttgcatgaagttgat
gctcacaatattgtgcctacttgggttgcatcggagaaattggagtatagtgctaggact
ataaggggtaagatcaataaactacttcctgagtatctcattgattttccaacattacaa
cctccgagtgtaaaatgggctggcacgaatcagtccatagattgggatgacctgattact
gaagttttgagggaaggggcagaagtccctgaaatcaaatggtgtgaatcaggagaaaat
gcagcagtggaaatattgatgggaagtaaaaatgggttcctgacaaagaggttgaagaat
tattctacagaccggaataacccattaaagcctggagcgctctctggtctctctccatat
ttgcattttggacaaatatctgcacagcggtgtgccttagaggcaaaaaaaattcagaaa
aattgccctcaggcagttgatgtgttcttggaggagttgattgtgcggagggaacttgct
gataacttttgcttctaccagcctcgatataattcattacagggggcatgggaatgggcg
cgtaagaccttgatggaccatgcctctgacaagcgagaacatatctatacgaaggagcaa
ctggagaatgcacaaactgccgatcctctctggaacgcttctcagttggagatggttcat
tatgggaagatgcatggttttatgcggatgtattgggcaaagaagatccttgaatggacc
agaggacctgaagaagcccttgcaatatcaatttatttgaacgacaagtatgaaatagat
gggagggatccaaatggatatgttggctgcatgtggtcgatctgtggtgttcatgaccag
ggttggcaagagcgacagatatttgggaaaattcgctacatgaactatgcaggctgcaag
aggaaatttgatgttgatggatacattgcatatgttaagaggctagttactgaaaccaag
aagaggaaagcagaaagctctctaggtaaggaagcaaaagaacttcgtgtttga
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