Vitis riparia (riverbank grape): 117907060
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Entry
117907060 CDS
T07274
Name
(RefSeq) LOW QUALITY PROTEIN: auxin response factor 17
KO
K14486
auxin response factor
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
117907060
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Motif
Pfam:
Auxin_resp
B3
Microp_apicomplexa_14
Ribosomal_S3_C
Motif
Other DBs
NCBI-GeneID:
117907060
NCBI-ProteinID:
XP_034676311
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Position
18:3780259..3789250
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AA seq
593 aa
AA seq
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MCPLPATELRPLDPSIWRACAGKSVHIPAVHSRVYYFPQGHVEQASSPPVLSPLVFSKPS
VLCRVVAVWFLADQDTDEVFAKIRLEPVGRSWESGTLERRRVGGGDDDKEDEGEDKVMSF
VKILTSSDANNGGGFSVPRFCADYIFPPLNFQADPPVQHLLFTDLRGTKWDFRHIYRGTP
RRHLLTTGWSKFVNDKKLVAGDSVVFMKRNSNGELFIGVRRDVRWNRNGERWSFRNALAG
AVKAKEVGGIEGFSRSSSGRVRAEEVAEAAELAARGMPFEVVYYPRVGSSDFVVKAEVVE
EALSVFWTGGMRVKMAMETEDSSKTSLFQGTVSSATVMDNGPWRGSPWRMLQVTWDEPEV
LQNVMRVSPWQVELVMPTPPFHTAPPPAKRFRIAQSPELPSDGEGEIFFPMADTVMGILN
PSLLNHNTFPAGMQGARQVSFYVSSLSNLTSENTHQMCTINSLDDMATKLNTVSTELNIG
SSLSDNLSPDSQGSVHFFGTKPVGNQDGNSSTKVGIHSFQLFGKVIHIKQPVEGNCSADG
CTEDXVVKKYNEANCVNNSLDLSLTYSYTKLLDGFDVHQISSSFQVDVSILCR
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcccctcccggcgacagagctccgtccgctggatccatccatatggagagcctgc
gccgggaaatccgttcatatccccgccgttcattctagggtttattactttccccaaggc
cacgtcgaacaagcctcttcccctcccgtcctctcccctctagtcttctccaaaccttct
gtcctctgtcgtgttgtcgccgtttggttcctcgcggatcaagatacggatgaggtattt
gccaagatcaggcttgagcctgttggtcgatcttgggagtctgggactttggaacgtaga
agggtggggggtggtgatgatgacaaggaagatgaaggggaggataaggttatgtcgttt
gtcaagattctgacctcgagcgacgccaacaatggcggtggtttctcggtgccgaggttt
tgcgcggactatatattcccgcccttgaattttcaggcagatccgcctgtgcagcatttg
ttgtttactgatcttcgtggtacgaagtgggattttcgccacatttatcgtggcacgccg
aggcggcatttgctcaccactggttggagcaagtttgtgaatgataaaaaattagtagca
ggagattcggtggtatttatgaagaggaattcgaacggcgaactgtttattggggtgagg
agggacgtgagatggaacaggaatggagagaggtggagctttcggaatgcactggcgggt
gctgtgaaagcgaaggaggttgggggcatagaggggttctcaaggagcagcagtggtagg
gttcgggcggaggaagtggcggaggctgcagaattggcagcgcggggcatgccgttcgag
gttgtttactatccacgggtagggtcatcggactttgtggtgaaggcggaggtggtggag
gaagcgctgagtgtcttctggactggaggcatgagggtcaaaatggcgatggagactgag
gattcatccaaaacttcattgttccaagggacagtttcgtctgctacggttatggataat
gggccttggaggggctccccctggcgcatgcttcaggttacatgggatgaacctgaagtt
ctgcagaatgtgatgagagtgagtccttggcaagttgaattggttatgcccacaccacca
tttcatactgcaccacccccagcaaagagattcagaattgctcaaagtccagagctacct
agtgatggagagggagaaatcttctttcctatggctgatacagtgatgggaatcttgaac
ccctcattgttgaatcataacacttttcctgctggcatgcagggagccaggcaagtttct
ttctatgtatccagtttatctaacttaacaagcgaaaatacccatcagatgtgcaccatc
aattcactggatgacatggcaacaaagttgaacactgtgtctactgagctgaacataggc
agttcactgtctgacaacttatcaccagatagtcagggcagtgtgcatttctttggtacc
aaacctgttggaaatcaggacggcaactcctcaacaaaagttggtattcattcatttcag
ttgtttggcaaggtcattcatataaagcagcctgttgaaggtaattgcagcgctgatggt
tgcacagaagatnnggtagtaaaaaaatacaatgaagctaactgtgtcaacaactcacta
gatctttctttgacgtactcttatacaaagctgcttgatgggtttgatgtccaccaaata
tcctcatcttttcaagtggatgtgtctattttatgcagataa
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