KEGG   Vitis riparia (riverbank grape): 117907112
Entry
117907112         CDS       T07274                                 
Name
(RefSeq) cyclin-T1-3-like isoform X1
  KO
K15188  cyclin T
Organism
vri  Vitis riparia (riverbank grape)
Pathway
vri03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:vri00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    117907112
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vri03021]
    117907112
Transcription machinery [BR:vri03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     117907112
    Brd4/P-TEFb complex
     117907112
    7SK RNP complex
     117907112
SSDB
Motif
Pfam: Cyclin_N CycT2-like_C Cyclin_C Cyclin_C_2
Other DBs
NCBI-GeneID: 117907112
NCBI-ProteinID: XP_034676389
LinkDB
Position
18:complement(11279200..11302089)
AA seq 443 aa
MSEQLRRNPSQHGIARDAISLYMPEEPQCSARKWYFSIQEIEHHSPSRKDGIDPKKEAQL
RKLYCSFLWELGMKLKVPQVAIATALMLCHRFYLRQSLAKNDWQIIATVSMFLACKAEET
PRLLRDVIIMAYEMTYRCDPPALKRIKQREVFDKQKELILIGERLLLGTIAFDLNIEHPY
KPIVDALKRMGISNNDLVKAAQNLINDWLCTTLCLQYKPHYIAAGSLFLAAKFHKVKLPT
EKGKVWWLQFDVAPKQLEEVIQQMRKLLENKTQAPSPTHARMTKPTVVLGNTTSHYPQPC
TARESSHGSTVGKPLVSKGSLNVAYSDSHCIVKEVIQHQTSGTSSATSVVEDGDGEIHSR
TRESERNSSYKFVSVHGKYSKINANPNKEKPLERRCSTASKRSTVARGDEMYSEVYIDGD
LRKGREQGYANSHKKQRRVLLGF
NT seq 1332 nt   +upstreamnt  +downstreamnt
atgtctgaacagttacgaagaaatccttctcagcatggaattgcaagagatgcaattagc
ttgtacatgccagaagagcctcagtgctctgcacgtaagtggtacttcagtatacaagaa
atagaacatcattctccatctcggaaggatggcattgaccctaagaaggaagcacagtta
cggaagttgtattgttcatttctttgggaacttggcatgaagcttaaagtgccccaggtg
gcaatagcaactgcactgatgttgtgccatcgcttttatctgcgtcagtctcttgcaaaa
aatgattggcagataattgcaactgtaagcatgtttcttgcttgtaaagcagaggaaaca
ccccgcttgctaagggatgttattattatggcatatgagatgacttataggtgtgatcct
cctgccctgaaaagaatcaagcagagagaagtttttgataagcagaaggaattaatatta
attggagagagacttctactggggaccattgcttttgatctcaacatcgaacacccctac
aagccaattgttgatgctttaaagagaatggggatttcaaataatgaccttgtgaaagca
gcacagaatttaatcaatgactggctttgcacaacattgtgcttgcagtacaaacctcat
tatattgcagctggttcactgtttcttgctgccaaattccacaaagtgaaacttcctaca
gaaaaaggaaaggtttggtggctgcagtttgatgttgcacctaaacaattagaagaggtc
attcaacagatgcgcaagttgttggagaacaaaacacaggctccatctcctacacacgct
aggatgactaaacctacagttgtacttggaaacacaacgtcccattacccacaaccatgc
actgctcgggaatccagccatggcagtactgttgggaaacctttggtgtccaagggcagt
ctgaatgtggcctatagtgacagtcactgcattgtgaaagaagtgattcaacatcagacg
agtggcactagtagtgcaactagtgttgttgaggatggggatggcgagattcattcaaga
acaagagaatctgaaaggaactcaagttacaagtttgtttccgttcatggtaaatacagt
aagataaatgcaaacccaaataaagagaagcctttggaaaggagatgttctactgcttca
aagaggtcaacagtagccagaggtgatgagatgtatagtgaagtgtatatagatggtgat
ctgcggaaaggaagagagcagggatatgccaattcacataagaaacagaggagggtgttg
ttaggcttttga

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