Vitis riparia (riverbank grape): 117907153
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Entry
117907153 CDS
T07274
Name
(RefSeq) ribosomal RNA small subunit methyltransferase I isoform X1
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vri03009
]
117907153
Enzymes [BR:
vri01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
117907153
Ribosome biogenesis [BR:
vri03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
117907153
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
Motif
Other DBs
NCBI-GeneID:
117907153
NCBI-ProteinID:
XP_034676461
LinkDB
All DBs
Position
18:complement(11435815..11465456)
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AA seq
351 aa
AA seq
DB search
MAMSPATTLQRRWRLPNFTPTITALTSLKSISFSPSLKPKHGALSCSTDSINHSPQESSK
GGHLKPGLYLVGTPIGNLEDITFRALRVLRSANVILSEDTRHSGKLLQHYDIKTPLLSYH
KFNESRREQTVLKRLREGDLVALISDAGTPGISDPGMELAKLCVDENIPVIPIPGPSALV
AALSASGLATNEFTFVGFLPKHAGSRRERLTVSANEAATQVFFVPPHKLHQFLEETSSLF
GDTRRCVIAREMTKIHEEFWRGTLGKAKEAFSNHHPKGEITLLIEGKESCVVENPSEFQL
ENELGDLISKGHSLSMAVKLVAEGTSMRRKTIYSLALRKFGKQLEAGDDSN
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgtctccggccacaactcttcagcggcggtggagacttcccaacttcactcca
actataacggccttaacatctctgaaatcgatctctttttctccttctcttaaacctaaa
catggcgccctctcctgttccacggattctatcaaccacagtccccaagaatcgtcaaaa
ggaggccatctgaaaccaggcttgtatttggttggaacaccaattgggaatctggaagac
atcacttttcgcgctcttcgtgttttaagatcagccaatgtgatactttcagaagacaca
aggcattcaggaaagttgctacaacattatgatattaaaactccccttttgagttatcac
aaattcaatgaatctcgaagagaacagacagtactaaaaagattaagagagggggatctt
gtggcacttatcagtgatgcagggacaccaggcatcagtgaccctggtatggaattggca
aaattatgtgtggatgaaaatattccagttatacccatccctggtccttctgctttggta
gctgctctttctgcctcaggcttggccaccaatgaatttacttttgttggatttctccct
aaacatgctggatcaaggagagagaggctaacagtttctgcaaatgaagcagcaacacag
gtattctttgttcctccacacaagcttcatcagtttcttgaggaaacttcttcactcttc
ggtgacacgagacgatgtgtcatagcccgcgaaatgacaaaaatacatgaagagttttgg
cgcggtacactggggaaagcaaaagaagcattttcaaatcaccatcctaagggagaaatt
acactcttgattgaaggaaaggaaagttgtgtggttgaaaatccatcagagtttcaactc
gaaaacgaattgggagatttgatctccaaagggcatagtctttctatggcagttaaacta
gtggctgaaggaacatcgatgagaagaaaaacaatatattcgcttgcattgaggaaattt
ggaaagcaacttgaggcaggggatgattcaaattaa
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