Vitis riparia (riverbank grape): 117907210
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Entry
117907210 CDS
T07274
Name
(RefSeq) replication factor C subunit 3-like
KO
K10756
replication factor C subunit 3/5
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03030
DNA replication
vri03410
Base excision repair
vri03420
Nucleotide excision repair
vri03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117907210
03410 Base excision repair
117907210
03420 Nucleotide excision repair
117907210
03430 Mismatch repair
117907210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vri03032
]
117907210
03036 Chromosome and associated proteins [BR:
vri03036
]
117907210
03400 DNA repair and recombination proteins [BR:
vri03400
]
117907210
DNA replication proteins [BR:
vri03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
117907210
DNA Replication Termination Factors
ELG1-RFC complex
117907210
Chromosome and associated proteins [BR:
vri03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
117907210
DNA repair and recombination proteins [BR:
vri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
117907210
Check point factors
HRAD17(Rad24)-RFC complex
117907210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
RCF1-5-like_lid
nSTAND3
Motif
Other DBs
NCBI-GeneID:
117907210
NCBI-ProteinID:
XP_034676552
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All DBs
Position
2:complement(10870637..10873860)
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AA seq
442 aa
AA seq
DB search
MPKLDPYPTSPWNSESQYGGNNHCHSPSNATPSTCWGKTVGPFRNRKSYDISTQESIHQL
TQKAEATYYDERSDSYYRGILELESVINLRRKSTGCSSPGRDSHYTATIATSGATSLFLR
IWGHSCFHSRESLFPSSIGQKPLRRRESAEPSLTNEKKKLDVDLMKDHTSANEKSLKEKA
PAVVEQIPTMMIFKEKVGQKFKWADKYQPRTLTDFICHRDKAHMLRCLVRSGQSDHFIFE
GSPGVGKRTMARALLGEVFGTHRLETTEALKDFNLEEGPSSSIQINVKISAHHIEVNLSE
LQELDAAHVVMELIKESSAIALNQKQSQCDNTSSNRAIILCGAEKLSEGDQLLIRDHLQT
YRGHFKVYFCYSGTSMLQHLKSLCTVIQIPTPSKEEIVEVLEFIAKHEAIELPPRLAENM
AEKAKHSVRQAIRSFEATWKLK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaactcgatccttatccgacctcaccatggaattctgagtctcaatatggagga
aacaatcactgccactcgccatcaaacgccacaccttctacatgttgggggaagactgta
gggccattcagaaaccgtaagagctatgatattagcactcaagaaagtatacatcagttg
actcaaaaagcagaggctacatactacgatgagcgttctgattcatactaccgtggaata
ttggagttggagtctgtgattaatcttagacgcaaatccacagggtgtagtagtcccgga
agggatagccattacacagctacaattgcaacttctggggcaactagtctcttccttaga
atatggggccattcttgcttccacagtagagaaagtttatttccttcctcaattggtcag
aagcccttacgaaggagagaatcagcagaaccatcattaacaaacgagaagaagaagctg
gatgtcgatttgatgaaagaccatacgtccgcaaacgagaagtcactgaaagagaaagca
ccagctgtagttgaacagataccaactatgatgatttttaaggaaaaagtggggcaaaaa
ttcaaatgggcggataaatatcaaccgaggactctgaccgacttcatctgccatcgggac
aaagcccacatgcttcgttgtttggtgagaagcggacaatctgatcacttcatatttgaa
ggatctccaggagtaggaaagagaaccatggccagggcattgcttggagaagtgtttgga
actcacagactagaaacaacggaggcactcaaggatttcaacttggaggaaggtccaagt
tccagcatccaaataaatgtgaaaatatcggcacaccacatagaggtcaatctatcagag
ttacaagaactcgatgcagcacatgttgtcatggaactgattaaggagtcatctgcaatc
gcattgaaccaaaagcagtcgcagtgtgacaacacaagtagcaatcgagcaattattctc
tgtggggctgagaaactgtctgagggtgatcaactccttatcagagaccatctacagact
tatagaggccatttcaaggtctacttctgctattctgggacttcaatgcttcaacatctc
aagtccctttgcactgttattcaaattccaacaccatccaaggaggagatagttgaagtg
ttggagttcattgctaaacatgaagcaatagagttgcctcccagattggctgagaatatg
gcagagaaggccaagcatagcgttcgacaagctatacgctcctttgaggccacttggaaa
ttgaagtaa
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