Vitis riparia (riverbank grape): 117907215
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Entry
117907215 CDS
T07274
Name
(RefSeq) protein PIGMENT DEFECTIVE 338, chloroplastic-like
KO
K02945
small subunit ribosomal protein S1
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
117907215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
vri03011
]
117907215
Ribosome [BR:
vri03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
117907215
Bacteria
117907215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP4
RAB3A-like_C
Motif
Other DBs
NCBI-GeneID:
117907215
NCBI-ProteinID:
XP_034676564
LinkDB
All DBs
Position
18:complement(23001772..23025304)
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AA seq
513 aa
AA seq
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MPIVLAHPSNSLSFRFSSHSPLNSNISFTSFHNTPKLPLRKPQSKTLVSPKNSPVWRTTQ
ISFCSPNDIFYDISSTQLPETPEIDGVQDIEELELLGKPSPVPLNNGSASDVDSELKKPD
KDEALAPFLKFFKPRESSEEANGASGEDGSEISESGSTKLVSVEYYEPKPGDFVVGVVVS
GNENKLDVNVGSDLLGTMLTKEVLPLYDKEMEYLLCDVEKDAEEFMVHGKMSIVRNDDAL
SRVPMQGSPVVETGTVLFAEVLGRTLSGRPLLSTRRFFRRIAWHRVRQIKQLNEPIEVRI
TEWNTGGLLTRIEGLRAFLPKAELLNRVKSFTELKENVGRRLYVQITRIDEAKNDLILSE
KDAWEKSHLQEGTLVEGTVKKIFPYGAQIMIGESNRSGLLHISNITRARVTSVSDLLTVD
EKVKVMVVKSMFPNKIALSIADLESEPGLFLSNKEKVFSDAEEMAKKYRQKLPAVTATRK
LEPLPTDALPFHDEASLYANWRWFKFERDDGPN
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgccaatagtccttgcccatccctccaattccctctctttccgcttctcatctcactca
cctctaaattccaacatctcgtttacttccttccacaacacacccaaattaccacttcga
aaaccccaatcaaaaaccctagtttctcctaagaattcgcccgtttggagaacaacccaa
atctccttttgctctccaaacgacattttttatgatatttcgagtacccagctgccggaa
accccagaaattgatggggttcaagatattgaagagcttgaattgttgggtaagccttct
ccggtgcctttaaacaatggttctgcttcagatgttgattctgaattgaaaaagcctgat
aaagatgaggcattagcaccttttttaaagttctttaagcccagggagagttcagaggag
gccaacggagcatctggggaagatggcagtgagataagtgagagcgggtctactaaactg
gtgtctgtggagtattatgagccaaaacctggtgattttgtagtgggtgtggttgtttca
gggaatgagaacaagcttgatgtgaatgttgggtcagaccttctgggcacaatgctgacc
aaggaggtgcttcctttgtatgacaaagagatggaatacttgttgtgtgatgtggagaaa
gatgctgaggagtttatggttcatgggaaaatgagcatcgttaggaatgatgatgcattg
agtagggtacctatgcaagggagccctgttgtggagactggcaccgttttgtttgctgag
gttcttggaagaacgctcagtggccggcctttgctttctacacggcggttctttcggagg
attgcctggcatcgagtgaggcagataaaacaactcaatgaacctatcgaggttagaata
acagagtggaatactggtggtcttctgacaagaattgagggtttacgagcttttcttcct
aaggctgagttgttgaatagagttaaaagctttaccgagttgaaagaaaatgttggacgc
cgactatatgtgcagattactagaatagatgaagcaaagaatgacttaatactcagtgag
aaggatgcttgggaaaagtctcaccttcaagagggaacacttgtagaaggaactgttaag
aaaatttttccatatggagctcaaataatgattggtgaaagtaatagaagtgggttgctg
catatctcaaacatcactcgtgcccgagttacttctgtcagtgatttgctaacagttgat
gagaaggttaaagttatggtagtaaagtccatgtttcccaacaaaatagctctcagtatt
gctgacctcgaaagtgagcctggtctatttctatcaaacaaagagaaagttttttctgat
gctgaagaaatggcaaaaaagtataggcaaaagctgccagcagttacagcaactcgtaag
ttagaacctcttccaactgatgctctaccttttcatgacgaagcaagtttgtatgcaaat
tggagatggttcaaatttgaaagggatgatggaccaaactga
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