KEGG   Vitis riparia (riverbank grape): 117907240
Entry
117907240         CDS       T07274                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
vri  Vitis riparia (riverbank grape)
Pathway
vri03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vri00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117907240
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vri03019]
    117907240
   03041 Spliceosome [BR:vri03041]
    117907240
Messenger RNA biogenesis [BR:vri03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     117907240
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     117907240
Spliceosome [BR:vri03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    117907240
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 BRAP2 Ntox35
Other DBs
NCBI-GeneID: 117907240
NCBI-ProteinID: XP_034676600
LinkDB
Position
18:29501885..29506767
AA seq 348 aa
MGSKLKGNTTHTGDGASPGKIFIGGLAKDTTYAAFNKHFEKYGEITDSVIMKDRYTGQPR
GFGFVTYADPSVVDSVIEDTHVINGKQVEIKRTIPKGSGQSKDFKTKKIFVGGLPSTVTE
DEFKDFFSKYGKVEEHQIIRDHETNRSRGFGFIIFESEEVVDEILSEGNMIDMAGTQVEI
KKAEPKKASNPPHVSAFGSNSRARSFSDGFGGFGSSYGSYDSGFGAGPYRAAGGLGSRLG
GYGGYGSDGGEYGGGYGSFGSSNLGGYRGDPSLGYSSRFGPYGGGFSGSYGGSGLGGYGQ
GGESYGNYGGSGYASGYDSGAGASYGGAGGLYGRGGYSGSSRYHPYAR
NT seq 1047 nt   +upstreamnt  +downstreamnt
atgggttcgaaattgaagggcaatactactcacacaggcgatggtgctagtcctgggaag
attttcattggaggattggcgaaggatacaacctacgctgcattcaataagcactttgag
aaatatggagaaataacagactcggtgattatgaaagatcggtatactggtcaacccagg
ggatttgggtttgtcacctatgctgatccttcagttgttgacagtgtcattgaagataca
catgttattaacggaaaacaggttgagattaaaagaaccattccaaaaggctctggtcaa
tcgaaggatttcaaaacaaagaagatatttgttggtggattaccatctacagtcactgaa
gatgagttcaaggatttcttctccaagtatgggaaggtggaggagcaccagattatacgc
gaccatgaaaccaaccgttcgcggggctttggatttataatatttgaaagtgaagaggta
gtagatgaaatattgtcggaggggaatatgattgatatggcaggcactcaggtggagatc
aagaaagctgaaccaaagaaagcctcaaacccaccacatgtttctgcatttggtagcaac
tctagggctcgttctttcagtgatggctttggtggatttggcagctcatacgggagttat
gacagtgggtttggagctggtccatatagggcagctggaggtctgggcagtaggcttggt
ggatacggtgggtatggtagtgatggtggggagtatggtggtggttatggtagttttgga
agcagtaacttaggaggttacagaggggatccttcccttggttattctagtcgctttgga
ccctatggcggcgggtttagcgggagttatggtggaagtggtttaggtggatatggccaa
ggaggcgaaagctacggaaattatggaggttcaggctatgctagtggttatgattctggt
gctggtgctagttacggtggagcaggcggtctgtatggaaggggaggttatagtggcagt
agtcggtaccatccttatgcaaggtag

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