Vitis riparia (riverbank grape): 117907330
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Entry
117907330 CDS
T07274
Name
(RefSeq) vacuolar protein sorting-associated protein 45 homolog
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117907330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vri04131
]
117907330
Membrane trafficking [BR:
vri04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
117907330
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sec1
PCRF
Motif
Other DBs
NCBI-GeneID:
117907330
NCBI-ProteinID:
XP_034676728
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All DBs
Position
18:13965579..13975772
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AA seq
568 aa
AA seq
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MVLISAVRDYMCRMLQDISGMKVLILDSQTVSIVSVVYSQSELLQKEVFLVELVDSISMS
KESMSHLKAVYFLRPTSENIQHLRRQFASPRFGEYHLFFSNILKDTQIHILADSDEQEVV
QQVQEFYADFVAIDPFHFTLNMPSNHIYMLPAVVDPSGLQHYCDRVVDGIGAIFLALKRR
PVIRYQRTSDIAKRIAQETAKLMYQQESGLFDFRRTEVSPLLLVVDRRDDPVTPLLNQWT
YQAMVHELIGIQDNKVDLTNVGKLPKDQQEVVLSSEQDAFFKANMYENFGDIGMNIKRMV
DEFQQISKSNQNIQTVEDMAKFVDNYPEYKKMHGNVSKHVTMVTEMSKIVEERKLMLVSQ
TEQDLACNGGQVAAFEAVTNLLNDERVSDVDRLRLVMLYALRYEKESPVQLMQLFNKLAS
RSAKYKPGLVQFLLKQAGVDKRIGDLYGNRDLLNIARNMARGLKGVENVYTQHQPLLFQT
MESINKGRLRDVDYPFIGNHFQQGRPQDVVIFIVGGTTYEESRSIALQNASNSGIRFILG
GSVVLNSKRFLKDLEEAQRIARTSTNVV
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgatatcggccgtacgtgattatatgtgccggatgttgcaggacatctcgggc
atgaaggttcttatcctcgattctcaaacggttagtattgtgagtgttgtttattctcaa
tcagagcttcttcagaaagaagtgtttcttgtagaattggtggattccatttccatgtcg
aaggaatccatgtcgcatctcaaagctgtctatttcctcaggccaacctcggagaatatt
cagcatttacgacggcagtttgctagtcctagatttggagagtatcacctgtttttttcc
aacattttaaaggatactcagattcatattttagctgattcggacgagcaggaggttgtc
cagcaagttcaggagttctatgcagactttgttgcaatagatcctttccattttactttg
aacatgccatcgaatcacatttatatgctcccagcagttgtagatccttcaggtttgcag
cactactgtgatcgagttgttgatggcattggggcaattttcttggctttaaaacgacgg
cctgttattcgatatcaacgaacctctgatattgcaaaaagaattgcacaggaaacagcg
aaactgatgtaccagcaggaaagtggtctttttgacttcagacgaacagaagtatctcca
ttattgctggtagttgataggagggatgaccctgtcactccacttctcaatcaatggaca
tatcaggcaatggttcatgagttaataggtatccaagataataaagtagacctgacaaac
gttggcaagttgcctaaagatcagcaggaggttgtcctgtcgtctgaacaagatgcattt
tttaaagctaacatgtatgagaactttggagatattggaatgaatatcaaaagaatggtg
gatgagtttcagcaaatttcaaaaagtaaccagaatattcagacagtagaagatatggct
aaatttgttgacaattatcccgagtacaaaaaaatgcatggtaatgtttcaaagcatgtt
actatggtcacagaaatgagcaagatagttgaagagcgaaagcttatgttagtttcacaa
acggaacaagatttggcttgcaatggtgggcaagtggccgcatttgaggctgtgacaaat
ctcttaaatgatgaaagagtttctgatgttgaccgcttacgcctagtgatgttgtatgct
ttgcgctatgagaaggaaagccctgttcaactgatgcagcttttcaacaagttggcatcc
cggtctgcaaaatacaagcctgggcttgtccaattcctcttgaagcaagcaggtgttgat
aaacggattggggatctatatggaaatcgagatctcttaaatattgctcgtaacatggct
cgtgggctgaagggggttgagaatgtgtacacccaacaccagcctcttctattccaaact
atggaaagcatcaacaaagggcggttaagagatgtggactaccccttcattggaaatcac
tttcagcagggcaggccgcaagatgtggtgattttcatcgttggtgggacaacatatgaa
gagtcacgttccattgctctacaaaatgccagcaattctgggattcgttttatacttggt
ggatctgtggttctcaattctaagaggtttctgaaggacctggaagaagctcagaggata
gcacgcaccagcaccaatgtggtttga
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