Vitis riparia (riverbank grape): 117907335
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Entry
117907335 CDS
T07274
Name
(RefSeq) SWI/SNF complex subunit SWI3B
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117907335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vri03021
]
117907335
03036 Chromosome and associated proteins [BR:
vri03036
]
117907335
Transcription machinery [BR:
vri03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117907335
Chromosome and associated proteins [BR:
vri03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
117907335
PBAF complex
117907335
GBAF(ncBAF) complex
117907335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
SWIRM-assoc_1
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
117907335
NCBI-ProteinID:
XP_034676732
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Position
18:540457..544095
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AA seq
492 aa
AA seq
DB search
MAAQSPIKDPIGASTETLTQQPDSSSSIIPTVKSEIPVAASASPSVGVVPRASEPETINI
PSYSRWFSWNNVHECEVRFLPEFFDARSPSKNPRVYKYYRNSIILSFRQNPSRKLTFTDV
RKILVGDVGSIRRVFDFLEAWGLINYSGSALKQPLKWEEKDNKSGGASSHTGDAGGGAVE
SIPKRRWCSGCKSLCSIACFACDKFDLTLCARCYVRGNYRVGVNSSDFRRVEISEDTKAG
WTDKETLHLLEAVLHYGDDWKKVAEHVGGRNEKECVTHFIKLSFGEQYLGHTSSGDVDNK
FSQAKDQSDAGFGQENIGTSSASKKMRLTPLSDASNPIMAQAAFLSALVGVEVAEAAAQA
AVASLSDVDPRKMKEGLGSFANGARIQDPNVESNGDTTSNALEGAYIDAKSLLEREELDV
ERAISGITEVQMKEIRDKIVHFEEFELHMEKEWQQLQQMKSLLFVDQLTLLFQKAAAPKT
GELMGGENVRTD
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacagtcgccgatcaaagacccaatcggagcatccactgaaaccctaacccaa
caacctgattcctcttcctccatcattccaaccgtcaagtctgagattccggtcgccgcc
tccgcttccccttcagttggggttgttccccgtgcttctgaaccggagaccatcaacatc
cccagctattccaggtggttttcgtggaacaatgtccacgaatgcgaggttcggttcctt
cctgagttcttcgacgctcggtccccgtccaagaaccctagggtttacaagtattaccgt
aattcgataatcctgtccttcagacaaaacccttcgaggaagctcacgtttacggatgtt
cggaaaattcttgttggagatgtgggatccattcgcagggtttttgattttctggaggct
tggggtttgattaattactccggttctgccttgaaacagccgttgaaatgggaagagaag
gataataagtccggtggggcgtcttcgcataccggggatgctggaggaggtgctgttgaa
tctattcctaagaggagatggtgcagcggctgcaaatccctctgcagcattgcttgtttt
gcctgtgataagtttgacttgactctctgtgcacggtgctatgttcgtggcaattatcgg
gttggggtcaattcttcagattttaggcgagttgaaatcagtgaagacacaaaagcaggt
tggactgacaaagaaactttgcaccttttagaagctgtcttgcattatggtgatgactgg
aagaaggttgcggagcatgttggtggtagaaatgagaaagaatgtgttactcattttatc
aagctttcttttggggagcaatatcttggacatacaagctctggggatgttgataacaag
ttttctcaagcgaaggaccagagtgatgctggatttggacaggaaaatattggcacttct
tccgcaagtaaaaaaatgcgactcacaccactttctgatgcaagcaacccaattatggct
caggctgcattcttgtcggctttggtgggtgtagaggttgcagaagctgctgctcaagca
gctgttgcatctttgtcagatgtggatcctagaaaaatgaaagagggtcttggatctttt
gctaatggtgcaagaatacaagaccctaatgtggaatccaatggcgacaccacctcaaat
gcgttggaaggagcttatatagatgcaaagtcactgctcgagagggaagagctggatgtg
gagagagcaatttctggcattactgaagtgcagatgaaggagattcgggataagattgtt
cattttgaggagtttgaattgcatatggagaaagagtggcaacagctccaacaaatgaag
agcctactctttgttgatcagctcacccttctgtttcaaaaagctgctgcaccaaaaact
ggagaattgatggggggcgagaatgttagaacagattga
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