Vitis riparia (riverbank grape): 117907539
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Entry
117907539 CDS
T07274
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vri03019
]
117907539
03041 Spliceosome [BR:
vri03041
]
117907539
Messenger RNA biogenesis [BR:
vri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
117907539
Spliceosome [BR:
vri03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117907539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_KhpA-B
KH_2
KH-I_KHDC4-BBP
KH_N4BP1_1st
KH_BICC1_1st
Motif
Other DBs
NCBI-GeneID:
117907539
NCBI-ProteinID:
XP_034677001
LinkDB
All DBs
Position
18:complement(34985365..34996897)
Genome browser
AA seq
775 aa
AA seq
DB search
MAEEEVVVVAGAGASPAPSDHKRKLEDLEPEAPEHAEPDGVQGADAGDYVANDESEAKRP
RVEDQDDDLATENGYQREKEDEVIKENVELTVENAQSQEAPHPTEEAPEAVNDEQPSTDN
EQKEDTQEPSIENPQLENPQQPTGEEFEKPAEEIPQQEVGDVPSAEVQQEPTSETQTMSR
KMEVPNNKVGVLIGKAGDTIRFLQYNSGAKIQITRDADADPYSASRPVELIGSLENINKA
EKLIKDVIAEADAGGSPSLVARGFATAQAVGAAEQVQIQVPNEKVGLIIGKGGETIKSLQ
TRSGARIQVLIPQHLPEGDQSKERTVRVTGDKKQIEMAREMIKEVMNQPVRSSTYPGSYN
QQGYRPRGPTGPSQWGPRGPHPGQPTGYDYQRGAYPSQNQQYAPPSYGGYPPQQMAPRSS
FGSGWEQRPPANMQGPPQSGGYDFYGGQGGHGPDAPAAAPHSASMSIHAPGPSPSPGMGP
PPSQGNYNYGQPQGPDYGQQAQYSQTGPPQQGYGHGYDEPKYEGQAPTHPPYGGHGSQPV
YPQGGAQSGYPPQQAYGKPQSYGMASQAPAAQSYGPPRASQPGDVPYQGPMSSNQSYGPN
VPPQQYPYASSGPMQQSYPAYGSQPAADGYNQPQPASGPGYPQQGGQPMSGYSQPGGQQA
PGYAQVGPQGGYGPYPSQPGYAEQQTANNAAYGYQGPADPTYNSGPASAYGAQPSGQPGY
VQPTPTQPSYDQSIPAQSGGYGAVPATAPVGYGKSLSPQPGYPQYDATQMYGAHR
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagaagaggtcgtcgtcgtcgccggagccggcgccagccccgcgccgtccgat
cacaagcggaagctcgaagatttggagcccgaagccccggagcacgcggaaccggacggt
gtccagggcgctgacgcgggggactatgtggcgaacgatgagtcggaggcgaagcgtcct
cgggtcgaggaccaggatgatgatttagcgactgagaatggataccaaagggagaaagaa
gatgaggttataaaggaaaatgttgaactgactgtggagaatgcccaatcacaggaagct
ccacatccaactgaggaagctccagaggctgtgaatgatgagcaaccttctactgataat
gagcagaaggaggatacccaagaaccctcaattgagaatcctcagttggaaaatcctcag
caacccactggagaggaatttgagaaacctgctgaggaaattcctcaacaagaggtcggg
gatgttccctctgccgaagtgcaacaggaacctacatcagagactcagacaatgtcacgg
aaaatggaggtccctaataataaggttggggttcttattggtaaagctggcgatactata
cggttccttcagtacaactcaggggcaaaaatccagatcacaagggatgctgatgcagat
ccatattctgcctcaaggcctgtagaactaataggaagcttggaaaacataaacaaggct
gagaaacttataaaggatgttattgcggaggctgatgcagggggttctccttcccttgta
gctagaggttttgctactgcacaggctgttggagctgcagaacaagttcagatacaagtt
ccaaatgagaaggttggtttaatcataggcaaaggtggggaaaccattaaaagcctgcag
accagatcaggggctcgcatccaggtattgatacctcaacatctccctgaaggagaccaa
tctaaagaaaggactgtgagagttactggtgacaagaagcaaattgagatggctagagaa
atgataaaggaagttatgaatcagcctgtgagatcatcaacctacccaggcagttataac
caacagggctatcgacctcgtggtcccactggaccatctcaatggggccctcggggtcca
catcctgggcagccaacagggtatgattaccaacgaggagcttatccatctcagaatcag
cagtatgcgccgccttcatatggtggttatcctccacaacaaatggccccaagaagcagc
tttggttcagggtgggagcaaaggccccctgctaacatgcaggggcctccacagagtggt
ggctatgatttctatggtggacaaggaggccatggtcctgatgcccctgctgctgctcca
cattctgcttctatgtccattcatgcacctggtccttcccccagccctgggatgggtcca
cccccttcccaaggaaattacaattatggacagccacagggtccagattatgggcaacag
gctcagtattcccaaacaggacctcctcaacagggctatgggcatggatatgatgaacca
aaatatgaaggtcaggctccaacacatcctccatatggaggacatggttctcagcctgtt
tacccacaaggtggtgctcaatcagggtatcccccacaacaggcatatggtaagccacaa
tcatatggcatggcatcacaggcaccagcagcccaatcctatggcccacctagggctagt
caacctggggatgttccttatcaaggtcccatgtcttcaaaccaatcatatggtccaaat
gtacctccacaacaatacccatatgcatcaagtgggcccatgcagcaatcttatcctgct
tatgggtctcaaccagctgctgatgggtataatcagccacaaccagcatccggcccagga
tatccacagcaaggtggccagcctatgtcaggttacagtcaacctggtggacagcaggca
ccaggctatgcgcaagtgggtcctcaagggggttatgggccatacccttcacaaccagga
tatgccgaacaacagactgcaaacaatgcagcttatggataccaagggcctgcagatccc
acttacaacagtgggcctgcctcagcctatggtgcacaaccaagtggccagccaggttat
gtccaaccaacgcctactcagccaagctatgatcagtcaatccccgcacagtcaggtggc
tatggagctgtaccagcaactgcaccagttggttatggaaaaagtttgtcaccccagcca
ggttatcctcagtatgatgcaactcagatgtatggtgcgcatcgctga
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