KEGG   Vitis riparia (riverbank grape): 117907587
Entry
117907587         CDS       T07274                                 
Name
(RefSeq) coatomer subunit beta'-2-like
  KO
K17302  coatomer subunit beta'
Organism
vri  Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:vri00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:vri04131]
    117907587
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vri04147]
    117907587
Membrane trafficking [BR:vri04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    117907587
Exosome [BR:vri04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   117907587
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 WDR55 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR75_1st EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_HPS5 NBCH_WD40 Beta-prop_DCAF4 Beta-prop_IFT140_1st ANAPC4_WD40 PEP5_VPS11_N Beta-prop_Vps41 Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_IP5PC_F Beta-prop_WDR75_2nd Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214 WD_LRWD1 Utp8_b_propeller
Other DBs
NCBI-GeneID: 117907587
NCBI-ProteinID: XP_034677069
LinkDB
Position
18:29712675..29715048
AA seq 320 aa
MAPALEIEKELVQQSERVKSVDLHPKEPWILASLYSGTVCIWNYLSQELVKSFKVAESPV
RSAKFIACKQWVVTGADDKFIRVFDYNTMEKIAEFEAHTDFIRSVAVHPTLPYVLSASDD
MLIKLWDWEKGWECTQTFQGHAHYVMQVAFSPKDANTFASASLDGTIKIWNLSSPAPDFT
LDGHSKGVNCIDYFMRGLKPYLISGSDDHTAKVWDYEAKSCVQTLEGHTNNVSAVCVHPE
LPLIITGSEDGNVRIWDGATYRLENTLNYGFERVWAFGCMKESNRVVIGYDKGTIMVKVL
RSQSGGFMGIRVEEEEKKEC
NT seq 963 nt   +upstreamnt  +downstreamnt
atggcccccgcattggaaattgagaaagagctcgttcaacaatcagaaagagtaaaatct
gtggatctacatcctaaggaaccatggattctagcaagtttgtattcaggaactgtgtgc
atctggaactacctctcgcaggaacttgtaaagtctttcaaggtcgcggaatcaccagtt
cggtcagcaaagtttatagcatgcaaacaatgggttgttactggggctgatgacaagttt
atccgagtcttcgactacaatacaatggagaagattgcagaatttgaggctcatactgat
ttcattaggagtgttgcagtccatcctacccttccatatgtgctgtcagcttctgatgac
atgctcataaagctttgggattgggagaagggttgggagtgtactcaaacgttccaggga
catgcccactatgtgatgcaagtggcatttagtcccaaagacgcaaacacttttgcaagt
gcttctcttgatggcaccataaagatttggaatctcagctcacctgcgccagactttaca
ctggatgggcattcaaaaggagtgaattgcattgattacttcatgagaggcttgaaacca
tatctgatctcgggttcggatgaccacactgctaaagtgtgggattatgaagccaagagt
tgtgtacaaacactggaaggccacacaaataatgtttctgcagtgtgtgttcaccctgaa
cttcccctcatcattacaggttctgaggatgggaacgttcgcatatgggatggagctact
tacaggcttgagaacacactgaactatggttttgaaagagtttgggcttttgggtgcatg
aaagaatcaaacagggttgtgattggctatgacaaaggaaccattatggtaaaagttctc
cgttctcagagtgggggtttcatgggcatccgggttgaggaggaagagaagaaggaatgt
tga

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