Vitis riparia (riverbank grape): 117907673
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Entry
117907673 CDS
T07274
Name
(RefSeq) RNA-binding KH domain-containing protein RCF3-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vri03019
]
117907673
Messenger RNA biogenesis [BR:
vri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
117907673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
MOEP19
DUF6591
Motif
Other DBs
NCBI-GeneID:
117907673
NCBI-ProteinID:
XP_034677188
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All DBs
Position
18:complement(6755587..6769267)
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AA seq
701 aa
AA seq
DB search
MSFSLTPSKRSYERSLTDSNGKGKWQKSGGFYSQNQLLKISPGTVVFRVLCPASKTGSVI
GKGGTIISQIRQETGVKVRVEETVSGCDERVVLITGSDKDTEADNEQSKEDGEDTKAAEE
VSDTKEPGENDEDKESVPVEDSQVEKGISSVQKALLLVFERMAEGESETNGGDEDSNKSS
TFVVRLLVLSSQVGCLLGKGGSVIKQMSAESGAQIRILPRDKLPLCASPSDELVQITGEL
DACKQALQSISQQLLENPPRDYDIVSTNPTGSSSHLFGPPLPRSEAQPPPNYSFPAQGAP
YAAGVRDTDYHSNTPQLHKFHESGMPGRMKPQDILTFRLLCHDERVGGIIGKGGTIIKNL
QNETGCEIKVLDGVPDSEDRVIFISGSAHPDDRISPAQDAVLRVQSRIVRAIPDSKEKTV
IARLLVSSTQIGCLLGKGGAIIAEMRKLSGAHIRILGKDQIPKCASENEEVVQINGEFEA
VQEALLQITTRLRHHHFRDAFSVNHPSNPAFTDQVPPFPPYLARREFSPPGMYSNLGPSF
HKFDAVGVLHPHGGFHPHDDRAPFMHSIHRLGIPPHIPERKPSSAPWGHQGLIEGGVPIG
LADFAGGPQRRIPGFGGGSQQAIITSTTVEVVVPRSLVPSIYGEDGGCLRQIRQISDAKI
TITEPKPGASETVIIISGTPEQTHAAQSLIQAFVLSETESP
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttttcattgacgccttctaagagatcatatgagcggagccttactgattctaat
gggaaagggaaatggcaaaagtcaggaggtttttattcacaaaatcaattgttgaaaatc
tctcctggtaccgttgtttttcgtgtactctgccctgcttctaaaactggtagtgtcatt
gggaaaggtggcaccataatttcacaaatacgtcaagaaactggtgtaaaggtaagggtt
gaggaaactgtgtccggatgtgatgagagagtggtacttatcactggttctgataaagac
acagaagctgacaatgagcagagcaaagaagatggtgaggacactaaggcagctgaagaa
gttagtgatacaaaggaacctggtgagaatgatgaagataaagaatccgttcctgtggaa
gattcacaagttgaaaagggaatttcatctgtgcagaaagctcttttacttgtttttgaa
agaatggcagaaggagaatcagagacaaatggaggggatgaagatagtaataagtcttct
acttttgttgtaaggttacttgtgctttctagtcaagtgggctgtcttctgggaaagggt
ggcagtgtcatcaagcaaatgtcagctgaaagtggggcacagattcgcattcttcctagg
gacaagcttcctctatgtgcatcaccttctgatgaactggttcagatcaccggggaattg
gatgcatgtaaacaagctcttcaatctatttctcaacaacttctggagaatccacctcgg
gactatgatatagtttctaccaatcctactgggtcatcatctcatttatttggtcctcct
cttcctaggtctgaagcacagccaccgccaaactactctttccctgcacaaggtgcacct
tatgctgctggggttcgtgataccgattatcactcaaatactccccaacttcataaattt
catgaaagtggcatgcctggtcggatgaaacctcaggatattctgaccttcaggttattg
tgtcatgatgagagggtgggaggtataattggaaagggaggaaccataattaagaacctt
cagaatgagacaggctgtgagatcaaagttttggatggtgttcctgattcagaggaccgg
gtcattttcatttctggttcagcgcacccagatgataggatatctccagcccaagatgca
gttctccgtgtgcagagcaggatagtcagggctatacctgatagcaaggagaagactgtg
atagcaaggctacttgtgtcttccactcaaattggttgcctcctagggaagggtggtgcc
atcatagctgaaatgaggaaattatctggggctcatatacgtatattggggaaggatcag
attccaaagtgcgcttcagaaaatgaagaagtagttcagataaatggagaatttgaagca
gttcaagaggcgcttttgcagataaccactaggttgcggcatcatcacttccgtgatgca
ttttctgtcaaccatccatctaatcctgcttttacagatcaagtaccgccttttcctcca
tatttggcaaggagggaattttcacctcctgggatgtattctaatttaggtccatccttt
cataagtttgatgctgttggtgtcctgcatccacatggtggttttcatccccatgatgat
cgagctccatttatgcacagcatccacaggctgggcatcccccctcatattcctgaaaga
aagccatcttctgcaccatggggtcaccagggcctgattgaaggtggtgtcccaatagga
ttggcagactttgcaggaggcccccaacgaagaataccaggatttggaggaggaagccaa
caagctattatcacaagcaccactgtcgaagttgttgttcctcgttctcttgttccttca
atttatggggaggatggtggatgtttgagacaaatccggcagatttctgatgcaaaaatt
accattactgagcctaaacctggagcatcagaaactgtgattataatatctgggacgcct
gagcagacccatgctgcacagagtcttattcaagcatttgtgttaagtgagacggaatcg
ccttga
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