Vitis riparia (riverbank grape): 117907738
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Entry
117907738 CDS
T07274
Name
(RefSeq) tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit trm6
KO
K03256
tRNA (adenine58-N1)-methyltransferase non-catalytic subunit
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vri03016
]
117907738
Transfer RNA biogenesis [BR:
vri03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
117907738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gcd10p
Motif
Other DBs
NCBI-GeneID:
117907738
NCBI-ProteinID:
XP_034677277
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All DBs
Position
18:complement(12446926..12460422)
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AA seq
464 aa
AA seq
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MSQNSLQNDSIQNPRVTWEGCSVLLDINDGDRLVFARLSAAATLKIGNKNCSLQPLIGCP
FGSLFQVDNGSRGPYLSRVVPSAEGNDLQETQDCQLKDEPKDNRAIVDNNKAQSLTGEDI
DEMRRQGATGDEIVEALISNSATYEKKTSFSQEKYRLKKQKKYSPRVLLRRPFCRSICEA
YFKKYPARIGFLRVDTLSLLLSMANIAAHSDVLVVDMVGGLLTGAVAERLGGTGYVCNAY
LGDTPYPMDIVRIFNFSSEICKRIVRSPVDGLRSIQDGTSGQFFQHKGVSNSETQSNEQM
SSQDSFPHSISTEEATLSSENGTLDLIPQMVIASPPQVAKTCKATKAGDNASLDAINLWK
ENGFSSLLIAAPELDAWSIVQEFLPFLSYSASFAIYHQYLQPLATCMHNLQLGKMAIGLQ
ISEPWLREYQVLPSRTHPCMQMSAFGGYILSGTRICSSDSQIQK
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaaaatagccttcaaaacgattcgattcaaaaccctagagtgacctgggaaggc
tgcagtgtgttgctcgacatcaacgacggcgatcgtctggttttcgctcgtctctctgcc
gccgcgactttgaaaattgggaataaaaactgctccttgcagccgttgattggctgtcca
ttcggttctttgtttcaggttgataacggatcgagagggccgtatttatctcgtgttgtt
ccctctgcagaaggtaatgatcttcaagaaacacaagattgccaattaaaagatgaaccc
aaagataatcgagcaatagttgataataataaagctcagagtcttactggtgaagatata
gatgaaatgcggagacagggtgcaacaggtgatgaaatagttgaagctctcatttctaac
agtgctacctatgagaagaaaacatcattctcacaagaaaaatataggcttaagaaacaa
aagaaatattcacccagagtgcttttgaggcgccctttttgtcggagtatatgtgaggct
tacttcaagaaatatccagctagaatcgggttcttgcgagtggacaccttgtctcttctg
ctttccatggctaatattgctgctcattcggatgttcttgtagtggatatggttggtggt
cttcttactggtgctgtggcagaacgtttaggaggtacaggctatgtctgtaatgcatat
cttggagatactccgtatcctatggatatagtgagaatattcaacttcagtagtgaaatc
tgcaaaagaatagtgcggtctcctgtagatggactccgttcaattcaagatggtacttct
gggcaattttttcaacataaaggtgtctctaactcagaaactcagtcaaatgaacaaatg
tcttcccaggattcttttccccattcaattagcaccgaagaagccactctttcatctgaa
aatgggacgctggatcttattcctcagatggtgattgcttctccacctcaggtggccaaa
acatgcaaagccacgaaagcaggagacaatgcatccctagatgccattaacttgtggaaa
gaaaatggtttttctagcctattaattgctgctccagagctggatgcgtggagcatagtt
caagaattcctgccatttttatcatattcagcctcctttgcaatttatcatcaatatctt
cagcctcttgcaacatgcatgcacaatctacagcttgggaaaatggcaatcggcttacaa
atttcagaaccatggctacgtgaatatcaggttcttccatcaagaacccacccatgcatg
cagatgagtgcatttggtgggtacattctaagtgggacaaggatttgcagcagtgactcc
cagatccaaaagtag
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