Vitis riparia (riverbank grape): 117907758
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Entry
117907758 CDS
T07274
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00900
Terpenoid backbone biosynthesis
vri01100
Metabolic pathways
vri01110
Biosynthesis of secondary metabolites
Module
vri_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
117907758
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
vri01006
]
117907758
Enzymes [BR:
vri01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
117907758
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
117907758
2.5.1.29 geranylgeranyl diphosphate synthase
117907758
Prenyltransferases [BR:
vri01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
117907758
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Motif
Other DBs
NCBI-GeneID:
117907758
NCBI-ProteinID:
XP_034677296
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All DBs
Position
18:complement(10459510..10461199)
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AA seq
371 aa
AA seq
DB search
MRSMTLVDRPWVRDFNQSSLFGSALGMSYGPIGAGPGCTSSVRVGTKTPHLHGAVFAIIT
KEDSVKEGKGPTQKETPFSFKDYMIQKASSVHKALDEAVYVKSPIKIYEAMRYSLLAGGK
RVRPALCLAACELVGGDESNAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVF
GEDVAVLAGDSLLAFAFEHIATATSGVPSSRIVAAVGELAKSIGAEGLVAGQVVDISSTG
QSDVGLDQLEFIHIHKTAALLEAAVVLGALLGGGSDEEVEKLRKYARQVGLLFQVVDDIL
DVTKSSQELGKTAGKDLVTDKATYPKLMGLEKSREFAENLNKEAKEQLSGFDLEKAAPLI
ALADYIAYRQN
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcgatgactttggtggatcgaccatgggttcgtgatttcaatcaatcaagctta
tttgggtctgcgctgggaatgagctatggccccattggggccggacctggttgcacatca
tctgtgagagtgggaacaaagacgccacatttgcatggtgcggtttttgcgattatcaca
aaggaggactctgtgaaggaggggaagggccccacccagaaggaaacgcccttcagtttc
aaggattacatgattcagaaggccagttcggtgcataaagccttggacgaggctgtttac
gtgaaaagccctatcaaaatctatgaagcaatgcgctactctctcctcgccggcggcaag
cgtgtccggccggctctctgtttagccgcttgcgagctcgtgggcggggatgagtccaac
gccatgccggcggcttgtgcggtcgaaatgattcacactatgtctctgattcacgacgac
ctcccctgtatggacaacgacgacctccggcgaggaaagccgaccaaccacaaagtcttc
ggggaagacgtcgccgttctggccggtgattctcttctggcattcgcattcgagcacatt
gcgactgccacaagcggggttccgtcatccagaattgtggcagcagtgggtgaattggcg
aaatccattggagcagaggggctagttgcagggcaggtggtggatataagcagtacagga
cagtccgatgtggggctagaccaactggagttcatacacatacacaagaccgcggcattg
ctggaggcagcggtggttcttggggccttactgggaggtgggagcgatgaggaggtggag
aaattgagaaagtatgcgaggcaggttgggctactgtttcaagtggtggatgacattctt
gatgtcaccaaatcatctcaggaactggggaagacggcaggcaaggatttggtaaccgat
aaggcaacctaccccaaactaatggggctggagaaatcaagagaatttgcagagaatctc
aacaaggaagcaaaggaacagctttctggatttgatttggagaaggcagcgcctttgatt
gcgcttgctgattatatcgcttaccggcaaaattaa
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