Vitis riparia (riverbank grape): 117908410
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Entry
117908410 CDS
T07274
Name
(RefSeq) putative multidrug resistance protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117908410
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vri02000
]
117908410
04147 Exosome [BR:
vri04147
]
117908410
04090 CD molecules [BR:
vri04090
]
117908410
Enzymes [BR:
vri01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
117908410
Transporters [BR:
vri02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
117908410
Exosome [BR:
vri04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117908410
CD molecules [BR:
vri04090
]
Proteins
117908410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
ABC_ATPase
AAA_29
RsgA_GTPase
AAA_21
AAA_22
AAA_16
AAA_15
AAA_25
nSTAND1
G-alpha
Motif
Other DBs
NCBI-GeneID:
117908410
NCBI-ProteinID:
XP_034677879
LinkDB
All DBs
Position
19:6267720..6272823
Genome browser
AA seq
1252 aa
AA seq
DB search
MGRKNSMFQYADGVDKWLMLLGTLGCIGDGLQSALSMFILSDIINDYGKSNSSITKHVVD
KYALKLLYVAVGVGISAFIEGICWTRTAERQTSRMRIKYLKSVLRQEVGFFDSQGADSSI
TYQVVSTLSSDANSIQAVIGEKIPDCLAYTAAFIFCLLFAFILSWRLALASLPFTVMFII
PGLGFGKLMMDLGMKMIESYGVAGGIAEQAISSIRTVYSFVGEHQTLVKFSQALQKTMEL
GIKQGFAKGLMMSSMGIIYVSWAFQAWIGTYLVTKKGESGGPLFVAGFNVLMGGLYVLSA
LPNLTSISEATAAATRIFEMIDRVPALDSEDRKGKALAYVRGEIEFKDIHFSYPSRPDSP
ILQGFDLRVRAGKTVGLVGGSGSGKSTVISLLERFYDPTKGEILLDGYKVNRLNLKWLRS
QMGLVNQEPVLFATSIKENILFGKEGASMELVVSAATAANAHDFITKLPDGYETQVGQFG
VQLSGGQRQRIAIARALIRDPKILLLDEATSALDTESERIVQDALDQALVGKTTIVVAHR
LSTIRMASMIVVLQNGRVVEKGSHDELMQMNGRQGGEYFRMVQLQQKAMQSEEDSFCSDY
QSDVKYQHRMYTAPSPISVRSSTPSTPALHAFSPAYSISAPFSIQFDPSEESYEEDSEKS
TYRPPSQWRLLKMNAPEWKSALLGCLGAIGSAAVQPINAYCVGTLISVYFITDESSMKSE
SRFYSYLFLGLCVYNFIMNLLQHYNFAVMGERFTKRVREKLLEKLMTFEIGWFDQEENNS
AAICARLATEASMVRTLVGERMSLLVQAVFATSFAYGLGLVLTWRLTIVMIAVQPLVIGS
FYSRTVLAKSMSSKARKAQKEGSQLASEATVNHRTITAFSSQRRILGLFKDSLKGPRKEN
VKLSWFSGFGLFMAQFLTTASMALAFWYGGRLMTQGLITPKRLFQAFLILTFTAKIIADA
GSMTSDLSKGSNAIRSVFAILDRKSEIDPENSWGIDPEKTTVKGRIELKNVFFAYPARPN
QLILKGLSLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPLRGSIHIDELDIKNHNLRIL
RSNIALVSQEPTLFAATIRENIAYGKENATESEIRKAAVLANAHEFISGMKDGYDTYCGE
RGVQLSGGQKQRVAIARAILKNPSVLLLDEATSALDSASERSVQEALDKMMVGRTCLVIA
HRLSTIQNSNTIAVIKNGKVVEKGSHSELLSFGPGGSYYSLIKPQVGDSPYR
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaaaaaacagcatgttccagtatgctgatggtgtggacaagtggttgatgttg
ttggggactctgggttgcataggagacgggttgcagagcgctctttctatgttcattcta
agcgatatcatcaacgactatggaaaaagcaatagttctatcacaaaacatgttgtagac
aagtatgcactcaagctactctatgttgctgttggagttgggatttcagcatttatcgaa
ggaatatgttggacaagaactgcagagagacagacttctcggatgagaataaagtacctg
aaatctgttctgagacaagaagttggtttctttgattcccaaggtgctgattcttcaata
acataccaggttgtctcaaccctctcctcagatgccaactcaatccaagccgtgataggc
gagaagatacctgactgccttgcctacacggctgctttcatcttctgcctgctgtttgcc
ttcatattgtcatggagattagcattggcgtctcttccttttacagtcatgttcatcatt
ccgggactgggatttgggaagctgatgatggacctgggaatgaagatgattgaatcttat
ggggttgctggtgggattgcggagcaggccatttcttcaataagaactgtatattcattt
gtgggagagcatcaaacactagttaagttcagtcaagcacttcagaaaactatggagcta
ggaataaagcaaggtttcgccaagggattgatgatgagtagcatgggaataatctatgtc
agctgggctttccaggcctggattgggacttatctggttactaagaaaggagaaagcggt
ggcccgttatttgtagctggattcaatgtcctcatgggaggattgtatgtcttgagtgca
ctcccaaatctaacttccatctcagaggcaacagctgctgctactcggatttttgagatg
atcgatcgagttcctgccttggactctgaagatagaaaggggaaggctttagcatatgtg
agaggagagatcgagtttaaggacatccattttagttacccatcaagacctgattcacca
attctacagggtttcgatctaagagttcgggctggtaagaccgtggggcttgttgggggc
agtggctctgggaagtccactgtcatttcattgcttgaaagattttatgaccccaccaaa
ggagagattctcttggatggatacaaagttaacaggcttaatcttaaatggttgagatcc
caaatgggtctggtcaatcaagagccagtcctctttgcaacttccataaaagagaacata
cttttcggaaaagaaggagcctcaatggagcttgtagtaagtgcagctacggccgcaaat
gctcatgacttcatcaccaagttaccagatggatacgaaacacaggttgggcaatttgga
gttcaactgtctggtgggcagagacagcgaattgccatagcgagggctctaatcagggat
ccgaaaatcctcctgcttgatgaagctacaagtgctttggatacagagtctgaaagaata
gtacaggatgcactggatcaagcattggtagggaagacaacaattgttgttgcccatcgc
ctctccacaatccgaatggccagtatgattgtggttcttcagaatgggagagttgtagaa
aaagggtcacatgatgagttgatgcaaatgaatggaagacagggcggggagtacttcaga
atggtacagttgcagcagaaggcgatgcaaagtgaagaggattctttctgttctgattat
cagtcagatgtaaaataccaacacaggatgtatacggcaccaagcccaatcagtgtcaga
tcaagcacaccgagtaccccagcattgcatgcctttagcccagcatattccatcagtgca
cctttctcaatccaatttgacccctctgaagaaagttatgaagaagattcagagaagtcg
acttatcgacctccttctcagtggcgtctgctgaaaatgaatgcacccgaatggaaaagt
gccttgcttggatgcctaggggccataggctctgcagcagttcaacccatcaatgcttac
tgtgtggggacacttatatcagtgtatttcatcactgatgagtcctccatgaaatctgaa
tccagattctattcctaccttttcttaggcctttgcgtttacaacttcatcatgaatctc
ctccaacattacaattttgcagtcatgggagaaagatttaccaaaagggttagggagaaa
ctgctagaaaagctgatgactttcgagattgggtggtttgatcaagaagagaacaatagt
gcagccatttgtgcaaggttagctacagaagccagcatggttcgaactcttgttggggag
cgtatgtcgttactggttcaagcggtctttgcgacttcttttgcatatggactaggactt
gtgctcacatggagactcaccattgtgatgattgcagtgcagccactagtcattggaagc
ttttactccagaactgttttggcaaaaagtatgtcttctaaagcccgaaaagcacagaag
gaaggaagccaattagcaagtgaagctactgtcaaccatagaactatcactgccttctct
tctcagagaagaatactggggctcttcaaagacagcctgaaaggtcctagaaaggagaat
gttaagctatcctggttttcgggctttggattgtttatggcccagttcttaacaacagct
tccatggctttggctttctggtatggagggaggctaatgacacaaggattaataacccca
aagcgcctttttcaagcattcttgatcttgacatttacggctaaaatcattgcagatgca
ggaagcatgacttctgatttatctaaaggaagtaatgccatccgatcggtttttgcaatc
ctggacaggaaaagtgagattgatccagaaaactcatggggaattgaccctgagaaaaca
acagtgaagggccggatagagctgaaaaatgtattctttgcatatccagcaaggccaaat
caattgatcctgaagggcctgagccttaaaattgaagcaggaaaaacagttgcattagtg
gggcagagtggctctggaaaatctaccatcatcgggcttattgagagattttacgaccca
ctgaggggatcaatacatatagatgaactggatatcaagaaccataacttaaggatcctg
agatcaaatatcgcactagtcagccaggagccaaccctttttgcagcaaccatccgtgag
aacattgcctatgggaaagaaaatgctacagaatccgagataaggaaggctgcagttctt
gccaatgcccatgaattcataagtggaatgaaagacgggtacgacacttactgtggagaa
agaggggttcaattatcaggaggccagaaacaaagagtagcaatagctcgtgccatactc
aagaatccatcagtcctgctcctggacgaggcgaccagtgccctggacagcgcatccgaa
aggtcggtccaagaagcacttgacaagatgatggttggaagaacatgtctagtcattgct
caccggttgtccacaatacagaactctaacaccattgctgtaatcaagaacggaaaggtc
gtggaaaaagggtcacattctgagcttctttcctttgggccgggcggctcatactactcc
ttaataaaaccacaagtgggtgactccccttaccggtga
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