Vitis riparia (riverbank grape): 117908449
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Entry
117908449 CDS
T07274
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG4 isoform X1
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vri04121
]
117908449
Enzymes [BR:
vri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117908449
Ubiquitin system [BR:
vri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117908449
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4
Prok-RING_4
Sina_RING
zf-RING_UBOX
zf-RING_2
zf-RING_5
vWA-TerF-like
TerY_C
zf-C3HC4_4
IBR_1
IBR_2
zf-P11
Motif
Other DBs
NCBI-GeneID:
117908449
NCBI-ProteinID:
XP_034677930
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All DBs
Position
19:complement(24900840..24916324)
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AA seq
450 aa
AA seq
DB search
MGNFFGFRRRSGNSRSVSSINGSFRINGDSSNSVVERRRAEVAARYPTTARSMSSEKEKG
GASHASSAASTASKPNKYSFIPDNFSTIEQVTNALRESGLESSNLIIGIDFTKSNEWTGK
VSFNNRSLHAIGDTPNPYEKAISIIGKTLAPFDEDNLIPCFGFGDATTHDSEVFSFHDDR
SPCHGFEEVLACYKRIVPNLQLSGPTSYAPVVEAAIDIVEKSGGQYHVLVIIADGQVTRS
VNANDKELSPQEEKTINSIVTASSYPLSIILVGVGDGPWEDMKKFDDKIPARGFDNFQFV
NFTAIMSKNASPSEKETAFALAALMEIPIQYKATVEFGILGRVTGKAKKVVPRPPPASYA
RHAPPPYAMPYGMPSYQPSNLSSRMPSRMPSRQLSNTRDEGNQACPICLTSVKDMAFGCG
HMTCRECASKVSNCPICREPIRNRLRIYTG
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgggtaatttttttggatttcgtaggcgtagcggaaatagcagaagcgttagcagcatc
aatggcagtttcagaatcaacggcgacagcagcaactctgtggtagagcggaggagagca
gaagtggcggcgcggtatccgacaaccgccaggtccatgtcgtctgaaaaggagaaagga
ggagcttctcacgcttcttctgctgcttccactgcttccaagcccaacaagtactccttc
atccctgacaacttctccaccatcgaacaggttacaaatgcattgagggagtcaggtttg
gaatcatcaaatcttattattggaatcgatttcactaaaagcaatgaatggacaggcaaa
gtctcattcaataatcggagtttgcatgccattggtgatacgcctaatccatacgaaaag
gccatttctattattgggaagactttggctccttttgacgaggacaacttaattccttgt
tttggctttggtgatgctaccacccatgatagcgaggtgttcagcttccatgatgatcgt
tcaccttgccatggctttgaagaagttttggcctgctataaaaggatagttccaaacttg
cagctgtcagggccaacttcttacgccccagtagttgaggctgccatagatattgtggag
aaaagtggtggacaatatcatgttttggttatcattgcagatggccaggttacaagaagc
gtcaatgcaaacgataaggaactcagtccacaggaagagaaaacaatcaactcaatagtt
actgcaagttcgtatcctctatccatcattcttgttggggttggcgatgggccctgggaa
gacatgaagaaatttgatgacaagatccctgcccgtggatttgataattttcagtttgtc
aacttcactgcaattatgtccaaaaatgcaagtccctcagagaaagaaacagcttttgct
cttgctgctcttatggagatccccatccagtacaaagcaactgttgaatttggtattctc
ggacgggtaaccgggaaagcaaaaaaggtggttccacgccctcctccagcttcctacgct
cgccatgcacctccaccttacgcaatgccttatggaatgccatcttatcagccaagcaac
ctctcatcacgcatgccatctcgtatgccatctcgtcagctaagcaatacacgagatgaa
ggaaaccaggcctgcccaatttgcctgaccagtgtaaaggacatggcctttggctgtggg
cacatgacttgcagagaatgtgcttcaaaagtgtcaaactgccccatatgtcgggagccc
atcagaaaccgcctcaggatatacaccgggtga
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