Vitis riparia (riverbank grape): 117908586
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Entry
117908586 CDS
T07274
Name
(RefSeq) E3 SUMO-protein ligase MMS21
KO
K22756
E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vri04121
]
117908586
03400 DNA repair and recombination proteins [BR:
vri03400
]
117908586
Ubiquitin system [BR:
vri04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
117908586
DNA repair and recombination proteins [BR:
vri03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
117908586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Nse
zf-RING_UBOX
zf-MIZ
zf-ANAPC11
zf-C3HC4
zf-NOSIP
LETM1_RBD
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
117908586
NCBI-ProteinID:
XP_034678127
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Position
19:complement(2703412..2709035)
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AA seq
266 aa
AA seq
DB search
MASTSAAASRDNGVPGRLRNAASTLYSDNQSLIAEIRKAMILMKEVAVDLERDGQSQMVK
ELEDAVVELLGTSEDCTQFSAAIQSVGNEHQPRPELTDFKKLFEDEVAKLKANSSFAPQS
HPLLRQFREAVWNVHHAGQPMPGDEQEDIVMTSTQCNLLNITCPLSGRPVTELADPVRSV
DCKHIYEKKAILHYIKSKHGRAQCPVAACPKILQAERVVCDALLQIEIDEMKSMSKQPGR
TDVIEDFTELDDDDEEEEEEEEEEDD
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgacctccgctgctgcttcccgcgacaatggcgtccccggaagactcaggaac
gccgcttccactctctactccgataaccaatctctcattgctgaaattcgaaaggctatg
attctgatgaaggaagtggcggttgatttggagagggacggccagtctcagatggtgaaa
gagcttgaagatgccgttgttgagttattgggaacatcagaagactgtacacaattttca
gctgcaattcagtctgttggaaatgagcaccaacccaggcctgagttaactgattttaag
aagttatttgaggatgaggttgcaaagctcaaggccaattcctcttttgctccacaaagc
catccattattacgtcaattcagggaagctgtttggaatgttcaccatgcaggacagcca
atgccaggtgatgagcaggaggacattgtaatgaccagtacacaatgcaacctcttgaat
attacttgcccattaagtggaagacctgttactgaattagcagatccagttcgcagtgtg
gattgcaagcatatttatgaaaagaaggccatcttgcactacataaaatccaaacatgga
cgcgctcaatgtcctgttgcagcttgcccgaaaatactgcaggcagaaagggtagtgtgt
gacgcattgttacaaattgaaattgatgaaatgaaatcaatgagtaagcaacctggtcga
actgatgtaatagaagatttcaccgagcttgatgatgatgatgaagaggaagaagaagaa
gaagaagaagaagacgactga
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