Vitis riparia (riverbank grape): 117908617
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Entry
117908617 CDS
T07274
Name
(RefSeq) translation initiation factor IF-2, chloroplastic
KO
K02519
translation initiation factor IF-2
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
vri03012
]
117908617
03029 Mitochondrial biogenesis [BR:
vri03029
]
117908617
Translation factors [BR:
vri03012
]
Eukaryotic type
Initiation factors
MTIFs
117908617
Prokaryotic type
117908617
Mitochondrial biogenesis [BR:
vri03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
117908617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
EF-G_D2
MMR_HSR1
Ras
GTP_EFTU_D2
IF2_N
RsgA_GTPase
MMR_HSR1_Xtn
Roc
PmbA_TldD_1st
Arf
Rv3651-like_N
SRPRB
MptE-like
Motif
Other DBs
NCBI-GeneID:
117908617
NCBI-ProteinID:
XP_034678163
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Position
19:complement(18800306..18810712)
Genome browser
AA seq
1015 aa
AA seq
DB search
MASLASLVSLGSAGASSSGHFEGSLLLQRRVSLLRRNFGGGKRWGLVSVCKYSGTMTNVI
AEEGNAVSVDSSTYRGGGKDEDNGLVLKPAPKPVLKPVNSVVSWDAGSKISGDSDDDEKL
ENVDERNKVIESLGEVLEKAEKLETGRLGELGSKRESGSVDKSPPGTNDNSTVGRTVNNS
NASKKSKTLKSVWRKGNPVATVEKVVKDASNNITNTEREGPEVRRKVETQPRIPLRPTQP
PLRAQPKLQAKPSVAPPPPVLKKPVILKDVGAAPKSSGIDETDSGKTRERKPILIDKFAS
KRPVVDPMIAQAVLAPPKPGKGPVPGKFKDDYRKKNASTGGSRRRMVAANDMEIPDDETS
ELNVSIPGAATARKGRKWSKASRKAARLQAAKDAAPVKVEILEVGEEGMLTEDLAYNLAI
SEGEILGFLYSKGIKPDGVQTLDKDMVKMVCKEYEVEVIDAAGVKVEEMARKKEILDEED
LDKLENRPPVLTIMGHVDHGKTTLLDHIRKSKVTASEAGGITQGIGAYKVLVPIDGKPQS
CVFLDTPGHEAFGAMRARGARVTDIAIIVVAADDGIRPQTNEAIAHAKAAGVPIVIAINK
IDKDGANPERVMQELSSIGLMPEDWGGDIPMVQISALKGENVDDLLETIMLVAELQELKA
NPDRNAKGTVIEAGLDKSKGPVATFIVQNGTLKRGDIVVCGGAFGKVRALFDDGGKRVDA
AGPSIPVQVIGLNNVPIAGDEFEVVGSLDIARERAEARAESLRQERISAKAGDGKVTLSS
FASAVSGGSQSGLDLHQLNIIMKVDVQGSIEAVRQALQVLPQDNVALKFLLQATGDISAS
DIDLAVASKAIVIGFNVRAPGSVKSYADTKGVEIRLYKVIYDLIDDVRNAMEGLLDAVEE
EITIGTAEVRATFTSGSGRIAGCMVKEGKVEKGCGIRVVRDGRAVYVGTLDSLRRVKEIV
KEVNAGLECGMGMEDYNDWEVGDIVQAFNKKQKKRTLEEASASMTAALEVAGIEK
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgctagcttcccttgtgagtttgggaagcgctggtgccagttcctctggacat
ttcgagggatctcttctgctacaacggagagtttccctattaagacgcaattttgggggt
gggaagagatgggggttggtttcggtttgtaaatattcgggcacaatgactaatgttatt
gctgaggaagggaatgcggtttctgtggattcttctacgtataggggtggtggtaaggac
gaggataatggtcttgtcctcaagcctgcgccaaagcctgtgttgaaacccgtaaattct
gtagtttcttgggatgcagggtcgaaaattagtggggactctgatgatgatgagaagttg
gagaatgtggatgagaggaataaggtgatagagtcactgggagaggtgttggagaaggcc
gaaaaacttgaaactggcaggttgggtgagttaggaagtaaaagggaaagtgggtctgtg
gataaatcaccccccggtaccaatgacaattcaacagttggtagaacggtgaataattca
aatgccagtaagaaatctaaaaccttaaagagtgtgtggcggaaaggaaatccggttgct
acagttgaaaaggttgttaaggatgcttctaataatattactaacactgaaagagaggga
cctgaggtcaggaggaaggtagaaactcagcccaggattcctttgagacccactcagccg
cctttgagagctcaaccaaagttgcaagctaaaccttcggttgctcctcctcctcctgtc
ttaaagaaacctgttatcttgaaggatgtgggggcagctcctaagtcatcagggattgat
gaaactgattcaggcaaaaccagagagcggaaaccaatcttgattgacaaatttgcttcc
aagagaccagtggttgatccgatgatagcgcaagcagttttagctcctccaaaacccgga
aaggggcctgtacctggtaaattcaaggatgattatcgcaagaaaaatgcttcaactgga
ggatcacgcagaagaatggttgctgccaatgacatggagattccggatgatgagacatca
gaactgaatgtgtctattcctggggcggctacagcaagaaaagggaggaaatggagtaag
gcaagtcgaaaggctgctagacttcaagcagctaaagatgcggctcctgttaaagttgaa
attctagaggttggggaagaaggtatgttgacagaagacttagcgtacaacttggccatc
agtgaaggtgaaattcttggttttctatactcaaaaggtattaagccagatggggtgcaa
actctggacaaagacatggttaagatggtttgcaaagagtatgaggtagaagttattgat
gctgccggtgttaaagtggaagaaatggcaaggaagaaggaaattcttgatgaagaagac
ctggacaaactagaaaacagacctcctgtcctgactataatgggtcacgtggatcatggc
aagaccacccttttggatcatattcggaagagcaaggtaactgcatcagaagcaggaggg
attacacaaggaattggtgcatataaggttttagtgcccatcgatggcaagccacagtca
tgtgttttccttgatacacctggacacgaggcgtttggggcgatgagagctcgtggagca
agggttaccgacattgctattattgttgtggctgctgatgatggaattcgtcctcaaaca
aatgaggccatagctcatgctaaagcagctggggtaccaattgtaatagctataaataag
atagataaggatggagctaacccagaacgagtcatgcaagaactttcgtctattggtcta
atgccagaagattggggtggtgatatcccaatggttcagatcagtgctcttaaaggggag
aatgtagatgatttgttagaaactatcatgcttgtagcagagttgcaagagttgaaggct
aatcctgatagaaacgcaaagggcacagtcattgaggctggtcttgataaatcgaaggga
ccggttgctacattcattgtgcagaatggaacactcaaaaggggagatatagtggtttgt
ggtggcgcctttggcaaggtgcgggctttgtttgatgatggtgggaagcgtgttgatgca
gctggaccttctatacctgtccaggtcattggattgaataatgttccaattgctggtgat
gaatttgaggtcgttggctcccttgatattgctcgagaaagagcggaggcacgtgcagag
tcattgcgacaagaacgtatatcagcaaaggctggtgatgggaaggttacactttcttcc
tttgcttctgcagtttcaggtggaagccagtctggattagacttgcatcagttgaatatt
attatgaaggttgatgttcagggttccattgaggctgtgaggcaagccttacaggtgctt
cctcaagataatgtcgctttaaagttcctcctccaagcaaccggggatataagtgctagt
gatattgatcttgcagttgctagcaaggctattgttataggatttaatgttagagcacct
ggctctgttaagagttatgctgacaccaaaggggtagagattcgactgtacaaagttatt
tatgatcttattgatgatgtgcggaatgcaatggaaggactcctggatgctgttgaggaa
gaaataacaattggcacagcagaagttcgggccacattcaccagcggcagtggccggatt
gctggttgcatggtaaaggagggaaaggtagagaaaggttgtggcattcgggtggtacga
gatggcagggctgtctatgttggtactcttgattctttgagacgagttaaagaaattgtg
aaagaggtaaatgctggactagagtgtgggatgggaatggaagactacaatgattgggag
gtgggagacattgtccaggccttcaacaagaagcagaagaaacgaacgcttgaagaggca
tcggcttcaatgacagctgcactggaagtggcaggtattgaaaaataa
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