Vitis riparia (riverbank grape): 117908667
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Entry
117908667 CDS
T07274
Name
(RefSeq) transcription factor MYB80
KO
K09422
transcription factor MYB, plant
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vri03000
]
117908667
Transcription factors [BR:
vri03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
117908667
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_CHD1_Hrp3
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
117908667
NCBI-ProteinID:
XP_034678225
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Position
19:complement(10044935..10046837)
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AA seq
325 aa
AA seq
DB search
MGRIPCCEKDNVKRGQWTPEEDNKLSSYIAQHGTRNWRLIPKNAGLQRCGKSCRLRWTNY
LRPDLKHGQFSDVEEQTIVKLHSVVGNRWSLIAAQLPGRTDNDVKNHWNTKLKKKLSGMG
IDPVTHKPFSHLMAEIATTLAPPQVAHLAEAALGCFKDEMLHLLTKKRIDFQFQQSGAAP
GNTAATYTANKQDEKDDTIEKIKLGLSRAMQEPTMLPLNKPWDSNGATSANFAGACSGFP
ISVPRFQYGPSSFGNEGDGSPWSQSMCTGSTCTAGDQQGRLREKLEDENGEETGGGKEIR
HSSSIFNSDCILWDLPSDDLMDPMV
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgggtcggatcccgtgttgcgagaaggacaatgttaagagggggcaatggacaccggag
gaagacaacaaactctcttcctacatcgcccagcatggcacccgcaactggcgcctcatc
cctaagaatgccggtcttcagagatgtgggaagagctgtaggctgcgatggacgaattac
cttcgtcctgatctgaagcatggccaattctcggatgtagaagaacagaccatcgtgaag
cttcattcagttgttggcaaccgctggtcattgatagcagctcagctgcctggccgcacc
gataatgatgttaagaatcactggaacaccaagctgaaaaagaagctttcaggcatggga
attgatccggtcacccacaagcccttttcccatctcatggccgagattgccaccacgctg
gctcctccacaggtggctcaccttgctgaagcggccctcggctgctttaaagatgaaatg
ctccacctgcttaccaaaaagcgtatcgacttccagtttcagcaatctggcgctgcacca
ggaaacactgcagccacttacactgccaacaaacaagatgaaaaagatgataccattgag
aagatcaagctgggattatcaagggccatgcaagagcctacaatgctacccttgaacaag
ccttgggactccaatggagccacttccgcaaattttgctggggcctgcagtggcttcccc
atatctgtccctagatttcagtatggcccatcatcatttggaaacgaaggcgatggatca
ccatggagccaaagtatgtgtactgggagcacatgcacagcaggggaccagcaagggcgg
ctgcgtgagaaactcgaggatgaaaatggggaagagactgggggtggaaaagaaattaga
cactcgtccagcatattcaattcagactgcatcctatgggatttaccatctgatgatctg
atggaccctatggtttga
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