Vitis riparia (riverbank grape): 117908860
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Entry
117908860 CDS
T07274
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vri03009
]
117908860
Enzymes [BR:
vri01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
117908860
Ribosome biogenesis [BR:
vri03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
117908860
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
Methyltransf_31
FtsJ
Serglycin
Motif
Other DBs
NCBI-GeneID:
117908860
NCBI-ProteinID:
XP_034678545
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All DBs
Position
19:9521735..9531384
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AA seq
619 aa
AA seq
DB search
MAPAALNKKKVTKSQKPPPQKKQKKEVFTAKPPKKHDISDDSDSPTEEIVDHEGLFEEEN
EEDGFDSHSEASSDGDDPFTDDFLQGGDDEEEGSGSGSDSGSDSDSDSDEFDIEKKSRAI
DEERAREEEEAGAEMQLNIKEESDEFRLPTKEELQEEARQPPDLPNLQRRIKEIVRVLSN
FKSLRQEGAQRKDYVEQLKVDLGSYYGYNEFLIGVLVEMFPVVELMELIEAFEKPRPICL
RTNTLKTRRRDLADVLLNRGVNLDPLSKWSKVGLVVYDSQVPIGATPEYMAGFYMLQSAS
SFLPVMALAPQEKERIVDMAAAPGGKTTYIAALMKNSGMIFANEMKEPRLKSLTANLHRM
GVTNTVVCNYDGKELPKVLGHNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCAHL
QKQLILAAIDMVDANSKSGGYIVYSTCSIMIPENEAVIDYALKKRNVKLVPCGLDFGRPG
FTRFREHRFHQSLEKTRRFYPHVHNMDGFFVAKLKKMSNSKPNPTPSEPSEVEEQAPEEN
DSDSELNMGEKTQQHPGKRGTKKENGGLKNAAPENGKKESPSTTTKRKKRKFPSREEISK
AREEKRKTMREKKGASKRS
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggcccctgcagcccttaataagaaaaaggtcacaaaatcacaaaaacctccacctcaa
aagaagcaaaagaaggaagttttcactgctaagcctccaaagaaacacgacatttctgat
gattctgatagcccaactgaagaaatagtagatcatgaaggactttttgaagaagaaaat
gaagaagatgggtttgattctcattctgaagcttcttctgatggagatgatccattcact
gatgatttcctccaaggaggtgatgatgaagaggaaggttcaggttcaggttcagattca
ggttcagattcagattcagattcagatgaatttgatattgagaagaagtcaagagctatt
gatgaagaaagggcaagggaagaagaagaagcaggggctgaaatgcagctcaacattaaa
gaagaatctgacgagttcagattgccaaccaaagaggagcttcaagaagaggcacgccaa
ccccctgatctcccaaatcttcagcggaggataaaagaaattgttcgagtactgtcaaat
tttaagtctttgaggcaagagggggctcaacggaaggattacgttgagcagctcaaggtc
gatttaggttcatactatggttacaacgaattcctcattggggttttggtggagatgttt
cctgttgttgaacttatggaacttattgaagcttttgaaaaacctcgacctatttgtcta
cggacgaataccttgaagacacgtagaagggatttggctgatgttctgttgaacagaggg
gtaaatttagatcccttgagcaagtggtcaaaagttggtttggtcgtgtatgactcacaa
gtgccaattggtgccactcctgaatatatggctggtttttacatgctgcaaagtgcaagc
tcatttttgcctgtgatggctcttgcccctcaagaaaaggaacggattgttgatatggcg
gctgcacctggtgggaagacaacctacattgctgctcttatgaaaaacagcgggatgatc
ttcgcaaatgagatgaaggagccaaggctcaagtcactcaccgcaaatttacatcgtatg
ggtgtcacgaatactgtggtctgtaactacgacggaaaagagctgcccaaggttttgggt
cacaatacagttgatagagtgttattggatgccccttgcagcgggactggggttatatca
aaagatgaatccgtcaaaacttctaaaagcttggaagatatacagaaatgtgctcattta
cagaagcaactaatacttgctgccattgacatggtggatgccaattcaaaatctggggga
tatattgtctattccacgtgctcgataatgattcctgagaatgaagcagttatagattat
gcactgaagaagaggaatgtaaaacttgtaccatgtggacttgattttgggcgtcctggg
tttacacggtttagggaacatcggtttcatcaatcattagaaaagactaggcgtttctat
ccccatgttcacaacatggatggattttttgtggcaaagttgaagaaaatgagcaactct
aagccaaatccaacaccttcagaaccatcagaagtggaggagcaagctcctgaggaaaat
gacagcgacagcgaattgaacatgggagaaaaaactcaacagcatcctggtaaaagaggg
acaaaaaaggaaaatgggggtttgaagaatgcagctcctgaaaatgggaaaaaagaatcc
ccatccaccaccacaaagaggaagaagaggaaattcccttccagagaagaaatctcaaaa
gccagagaagagaagagaaaaactatgagggaaaagaagggtgcaagcaaaaggagttga
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