Vitis riparia (riverbank grape): 117908903
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Entry
117908903 CDS
T07274
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117908903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vri03021
]
117908903
03036 Chromosome and associated proteins [BR:
vri03036
]
117908903
Transcription machinery [BR:
vri03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117908903
Coactivators
SAGA/TFTC/STAGA complex
117908903
Chromosome and associated proteins [BR:
vri03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
117908903
STAGA complex
117908903
TFTC complex
117908903
SAGA complex
117908903
SLIK complex
117908903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
TFIID-31kDa
Histone
CBFD_NFYB_HMF
MMS19_C
Motif
Other DBs
NCBI-GeneID:
117908903
NCBI-ProteinID:
XP_034678622
LinkDB
All DBs
Position
19:7855880..7862972
Genome browser
AA seq
547 aa
AA seq
DB search
MNIVPKETIEVIAQSIGISNFSPDVAPALATDVEYRVREIMQEAIKCMRHSKRTILTVDD
VDSALKLRNVEPLYGFTSGGPRQFKKAAGHKDLFYVDDKDVEFKDLIEAPLPKTPLDTGV
ITHWLAIEGVQPAIPENAPIEALAVPSDNKKSEYKEDGLPVDTKLPVKHVLSRELQLYFD
KIKELTLSRSDSILFKEALVSLATDSGIHPLVPYFTYFIADEVTRNLNDFSILFALMRVA
RSLLQNQQIHIEPYLHQLMPSIITCLVAKRLGSRFSDNHWELRSFTANLVASICKRYGHA
YHNLQPRVTRTLLHAFLDPTKALPQHYGAIQGLAAFGPSVVRLLILPNLEPYLRLLEPEM
QLEKQKNGMKRHEAWRVYGALLCAAGICMYDQLKTFPNLLSPPTRVILKSNKKILPTKPK
INPGKRKASTDNLMQQPPLKKLATDGSMGVMPINSLSVDKQGLTGGFSNSTAVGSSDVGL
SSMSQQLASENISGGRREVGTRALKASAVLAQAWKDVNAGQLSASLFEYFGESMFCFTPS
PESSLFL
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgaacatagtgcccaaagagacaattgaggtcattgcacaaagtataggaatttcaaat
ttctcgcccgatgttgctccggcccttgcaaccgatgttgagtaccgggtgcgcgaaatc
atgcaggaggcaatcaaatgcatgcgccactcaaagagaactatcttgacagtagacgat
gtggatagtgcactcaagctaagaaatgtggagccgctttatggcttcacctctggaggt
cctaggcagtttaaaaaagctgctggacataaagatttgttctatgttgatgacaaggat
gtggaatttaaagacttgattgaagcacccttaccaaaaacacctctagatactggagtt
atcactcactggctagctattgaaggagtgcaacctgcaattcctgaaaatgctccaatt
gaagcacttgctgtgccttctgacaacaaaaaatctgaatacaaagaggatgggcttcct
gtggacaccaaattacctgttaagcatgtactttcaagggagcttcagctttactttgac
aaaatcaaagagcttaccctgagtagatctgattctatcctatttaaagaagcattagtg
agcttggcaacagactcaggaattcatcctttagttccttattttacatatttcattgct
gatgaggtcacacggaatttgaatgatttctctatcctgtttgctttgatgcgtgttgcc
cgtagccttctccaaaaccagcaaatacacatagaaccttatctacaccaattgatgcca
tctattattacttgccttgttgcaaaaaggttggggagtagattctctgacaaccactgg
gagcttagaagcttcacagctaacctggttgcttcaatatgcaagagatacgggcatgct
tatcataacctccagccacgtgtgacaaggactctgctccatgctttcttggacccaaca
aaagcattgcctcaacattatggggcaattcaggggttggcagcatttggacccagtgtg
gttcgcttgcttatactgcctaatcttgagccatacttgcgacttcttgagccagaaatg
cagcttgagaagcaaaagaatgggatgaagagacatgaagcctggcgtgtatatggagcc
ttactgtgtgctgcaggtatatgcatgtatgatcagctgaagacattccccaatttgctg
tctccaccaacacgggtcatcttgaagagcaataaaaaaatcttgcctacaaaaccaaaa
atcaatccaggcaaacgcaaagcaagcacagataacttaatgcaacagccaccgctcaag
aaattagcaacagatggctcaatgggcgttatgccaattaactccctgtcagttgacaag
caagggttaacaggaggattttctaattcaactgctgtaggaagttctgatgttggtctg
tcatcaatgtcccagcagttagctagtgagaacatatcaggaggcagaagagaggtcggt
actcgagctctaaaagcatcagctgttcttgctcaggcttggaaggatgtcaatgctggg
caattgtcggcgtcattgtttgaatattttggtgaaagcatgttttgcttcactccctca
cctgagtcgtccttgttcttgtaa
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