Vitis riparia (riverbank grape): 117909329
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Entry
117909329 CDS
T07274
Name
(RefSeq) (-)-germacrene D synthase-like isoform X1
KO
K15803
(-)-germacrene D synthase [EC:
4.2.3.75
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00909
Sesquiterpenoid and triterpenoid biosynthesis
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
117909329
Enzymes [BR:
vri01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.75 (-)-germacrene D synthase
117909329
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Motif
Pfam:
Terpene_synth_C
Terpene_syn_C_2
Terpene_synth
MAPB1_N
Motif
Other DBs
NCBI-GeneID:
117909329
NCBI-ProteinID:
XP_034679219
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Position
19:complement(5482896..5485540)
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AA seq
560 aa
AA seq
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MFAQSSVVLLAQSQNATPAVARRCANFHPSIWGDRFLSYASEFTNANTYLEQQVQQLKEE
VRMLLITGADDSEQKLHLIDAIQRLGLAYHFDSEIDEALQHMFDGYVISAEKDDDVHTAA
LRFRLLRQQGYNVSCVDVFNKFKNSEGNFKESLSSDVRGMLSLYEATHLRVHREDILDEA
LAFCTTHLRSMAKYSSNPLAEQVDHALKQPIRKGLPRLEARHYFSIYQADDSHNKALLKL
AKLDFNLLQKLHQKELSDIAAWWKDLDFAHKLPFARDRVVECYFWILGVYFEPQFFLARR
ILTKVIAMTSIIDDIYDVYGTLEELELFTEAVERWDISAIDQLPEYMRVCYRALLDVYSE
IEEEMAKEGRSYRVYYAKEAMKNQVRAYHEEAKWLQVQQIPTMEEYMHVALVTSAYSMLA
TTSFVGMGDAVTEETFDWVFSQPKIVRASAIICRLMDDMVSHKFEQKRGHVASAVECYMK
QHGASEQETHKEFNKQVRDAWKDINEECLMPTAVPMTIVTRVLNLACVIDVIYKNEDGYT
HSETTLKDIITSMLIDAVPI
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctcaatcttcagtagtgcttcttgctcaatctcaaaatgccacccccgcagtt
gcccggcgctgtgcaaattttcatcctagcatttggggggaccgttttctttcatatgct
tccgaattcacaaacgctaatacttatttagagcaacaagttcaacaactgaaagaggaa
gtgaggatgctgttaatcactggggctgatgattccgagcaaaagttacacttgattgat
gcaatccaacggctaggcctggcataccattttgatagtgagattgatgaagcattacag
cacatgttcgatggttacgttatctctgctgaaaaagatgatgatgttcatactgctgct
ctccgatttcggttactaagacaacaagggtacaatgtttcatgtgtagatgtattcaac
aagttcaagaatagtgaaggaaacttcaaggaatccctcagcagcgatgtgcgggggatg
ttaagcttgtatgaagctacgcatctcagggtacatagagaagacatattagatgaagca
cttgctttctgcaccactcaccttcggtccatggcaaagtactcttcaaatcctctcgct
gaacaagtagatcatgccctaaagcagcccatccgaaaggggttacctaggctagaggcc
agacattatttttcaatataccaagcggatgattctcataataaagctctgctgaagcta
gcaaagttagatttcaacctattacagaaattacaccagaaggagctaagtgatattgct
gcgtggtggaaagatttagactttgcacacaagcttccttttgcgagagatcgagtagtg
gagtgctacttttggatattgggggtgtactttgagccccagtttttcttggctagaagg
atactgactaaagtaatagccatgacttccattattgatgacatctatgacgtgtatggt
acactcgaagaactcgagctcttcactgaagcagttgagaggtgggatatcagtgccata
gatcaactaccagagtacatgagagtgtgttatcgagcactcttagatgtatacagtgaa
attgaggaagaaatggccaaggaaggaagatcatatcgggtctactatgcaaaagaagca
atgaaaaatcaagtcagagcatatcatgaggaagccaaatggcttcaagtacaacaaata
ccaaccatggaggagtatatgcatgtggcattagttacctctgcatactcaatgctggcg
accacatcttttgtcggaatgggagatgccgtgacagaagaaactttcgattgggtcttc
agtcaacctaagattgtcagggcttcagcaataatttgcaggctcatggatgacatggtt
tctcataagtttgaacaaaaaagaggacatgttgcctcagctgttgaatgttacatgaag
caacatggtgcctcggagcaggaaacacacaaggaatttaataaacaagtaagagatgca
tggaaggatatcaatgaagagtgcctcatgccaacagctgttccaatgaccatcgtcacg
cgagttctaaatcttgcttgtgttatagatgttatatacaagaacgaagatggctatact
cactctgagaccactctaaaagatattataacctccatgctaatagatgcggtgccaata
tga
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