Vitis riparia (riverbank grape): 117909516
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Entry
117909516 CDS
T07274
Name
(RefSeq) (-)-germacrene D synthase-like
KO
K15803
(-)-germacrene D synthase [EC:
4.2.3.75
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00909
Sesquiterpenoid and triterpenoid biosynthesis
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
117909516
Enzymes [BR:
vri01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.75 (-)-germacrene D synthase
117909516
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GFIT
Motif
Pfam:
Terpene_synth_C
Terpene_syn_C_2
Terpene_synth
NGP1NT
DUF285
Zn_ribbon_3CxxC_2
CDC4_D
Motif
Other DBs
NCBI-GeneID:
117909516
NCBI-ProteinID:
XP_034679450
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All DBs
Position
19:complement(3036495..3040372)
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AA seq
561 aa
AA seq
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MSSFPLSITLKADPKLACNTANFLPNFWGDCFLTYTPDDTVTHACKEKELEGLKEEVRKE
LKATAGKSSQLLNFIDSIQRLGLAYHFEREIEEALKVMYETYNLVDDDNDDLASAALRFR
LLRQEGYHIPSDVFKKFKDEEGNFKESLVGDLPGMLALYEATHLMVHGEDILDEALAFTT
AHLQSMASDSDNPLKKQVIRALERPIRKSLIRVEARHYISIYQEYDSHNKSLLKLAKLDF
NLLQSLHRKELSEITKWWKGLDFATKLPFARDRIVEGYFWVLGVYFEPQYFLARRILLKV
MAMTSITDDIYDAHDIYDAHGTFEELKLFAEAIERWDASSIDQLPDYMKLCYQALLDVFE
EIEEEMTKQEKPYRVHYAKQAMKKQVQAYFVEAKWLKQEYIPTIEEYMTNALVSCGYFLL
TTISFVGMGDILTKKAFDWVFSDPKMVRASTIICRLMNDIVNHEFEQKRGYVVSGVQCYM
KQYGVTEQEACEEFNNEIMNAWKDMNEECLKPTQVPMPLLTRVVNFARVIDLLYKNQDEY
THVGKLMKDLIAWMLIDPVPM
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctttcccactatcaatcaccctgaaggctgatcctaagctggcttgcaacact
gcaaactttcttcctaacttctggggtgactgtttcctcacctacactcctgatgatacg
gtaacacatgcctgcaaagaaaaagaacttgaaggactgaaagaagaagtgagaaaggag
ctaaaagctactgctgggaagtcttcacaactgttgaacttcatagattccatccaacgc
ttgggcttggcttaccactttgaaagggagatagaagaagcattaaaagtaatgtatgaa
acatataatttggtcgatgatgataacgatgaccttgccagtgctgctcttcgattccgg
ttactaagacaagaaggctaccacattccatccgatgtatttaagaagttcaaggacgag
gaaggcaacttcaaggaatcattggtgggtgacttaccaggcatgctagctctatatgaa
gctacacacttaatggtgcatggagaagacatactggatgaagccctggctttcaccact
gcccaccttcagtccatggcatctgattcagataatcctctcaaaaaacaagtgattcgt
gctctagagcggccgattcgcaagagcttaataagggtagaggcaaggcattacatttcc
atctaccaagaatatgattcacataataaatctttacttaagcttgcaaagttagatttc
aacctgttgcagtcactccacaggaaagagctgagtgagatcactaagtggtggaaaggt
ttagattttgctacaaagctaccctttgcaagggacagaatagtggagggatacttttgg
gtattgggagtgtactttgagccccaatatttccttgctagaaggatcttactgaaagta
atggccatgacatcgattacagatgatatatatgatgcacatgatatatatgatgcacat
ggtacatttgaagaactcaaactctttgccgaagcgattgagagatgggatgccagcagc
atagatcaactcccagattatatgaagttgtgttatcaggctctcttagatgtctttgaa
gaaatagaggaagagatgaccaaacaagaaaaaccataccgtgttcactatgcaaaacaa
gcaatgaaaaagcaagtccaagcctactttgttgaagccaaatggttgaagcaggaatat
ataccaacaattgaggagtacatgaccaacgcactagtaagttgtggctactttctgctc
acaaccatatcttttgttggcatgggagatatattaaccaagaaggccttcgattgggtt
ttcagtgaccctaagatggttagagcttcaacaatcatttgcaggctcatgaatgacata
gttaaccatgagtttgagcaaaaaagaggatatgttgtctcaggagttcaatgctacatg
aagcaatatggtgttactgagcaagaggcgtgtgaggagttcaataacgaaataatgaat
gcatggaaggatatgaatgaggagtgtctcaaacctacacaagtgcccatgcctcttctc
acacgtgttgttaattttgcccgtgtgatagatctcttatacaagaatcaagatgagtac
acacatgtggggaagttgatgaaagatcttattgcatggatgcttatagaccctgtgcca
atgtaa
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