Vitis riparia (riverbank grape): 117909607
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Entry
117909607 CDS
T07274
Name
(RefSeq) protein transport protein Sec24-like At3g07100
KO
K14007
protein transport protein SEC24
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117909607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vri04131
]
117909607
Membrane trafficking [BR:
vri04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
117909607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
HVO_2753_ZBP
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
117909607
NCBI-ProteinID:
XP_034679566
LinkDB
All DBs
Position
19:complement(2474386..2490718)
Genome browser
AA seq
1052 aa
AA seq
DB search
MGTENPNRPSFPARPAATPFAAGPQPTMPFLSSGPVVGSQASGFRPTPSSTPQAAMPFLS
SGPVVGPETSGFRPTPPARFSDPSLPSVPSANAPPTLGPFQRFTTLQNPSTAQAPPARPL
PVGQPVFPPPVQPPAGQVPPVSFRPQSQLPSVPMGSPPQSMNSAPLRANAPQPPLDSSFS
ASRPSFQPSFPPPESTYPAARANLQPSFPGYPSKQSNAVPQAPAVQSPFLTQQGGYAAAP
PTSSPPFLAQPGGYIPPPPVAAPLGLHSREQMQHPGTGPPIGAVQGLIEDFSSLSVGSVP
GSIDLGIDSKALPRPLEGDVEPNSFAEMYPMNCHSRYLRLTTSGIPNSQSLVSRWHLPLG
AVVCPLAVPPDGEEVPIVNFAATGIIRCRRCRTYVNPYVTFTDGGRKWRCNICSLLNDVS
GDYFSHLDAIGRRIDLDQRPELIKGSVEFVAPTEYMVRPPMPPLYFFLIDVSLSAVRSGM
LEVVAQTIRSCLDELPGSTRTQIGFITFDGTIHFYNMKSSLTQPQMMVVSDLDDIFVPLP
DDLLVNLSESRSVVETFLDSLPSMFQDNVNIESAFGPALKAAFMVMSQLGGKLLIFQNTL
PSLGVGRLKLRGDDLRVYGTDKEHALRLPEDPFYKQMAADLTKYQIAANIYAFSDKYTDI
ASLGTLAKYTGGQVYYYPSFLSIIHQDRLRHELSRDLTRETAWEAVMRIRCGKGVRFTSY
HGNFMLRSTDLLALPAVDCDKAFAMQLCLEETLLTTQTVYFQVALLYTSSSGERRIRVHT
AAAPVVADLGEMYRQADTGAVVSLFCRLAIEKTLSHKLEDARNSVQLRLVKAFKEYRNLY
AVQHRLGGRMIYPESLKLLPLYALALCKSTPLRGGYADAQLDERCAAGYTMMTLPVKRLL
KLLYPSLIRIDEYLLKPTAQADELKRLPLVAESLDSRGLYIYDDGFRFVIWFGRMLSPEI
AMNLLGQDFAADLSKVSLYEHDNEMSRKLMGILKKFRESDPSYYQLCHLVRQGEQPREGF
FLLANLVEDQIGGTNGYADWILQIHRQVQQNA
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgggaactgagaatcctaatcgtccaagtttccctgcaaggcctgctgctacgcccttt
gcagctggtccccagcctacaatgccttttctatcatctgggcctgtggtgggatcacag
gcctctggatttagacccaccccatcatctactccccaggctgcaatgcctttcttgtca
tctgggcctgtggttggaccagagacctctggttttagacctactccaccagctaggttc
agtgatccatccttgccttctgtgccttcagcaaatgccccaccaactctgggacctttc
cagcgtttcacaacactacaaaatccttcaacagctcaagcacctcctgcacgccctcta
cctgtggggcaacctgtttttcctccaccagttcaacctcctgcaggtcaagttccacca
gtttctttccgtccacagtctcagctaccttcagtgcctatgggatctccgccacaaagc
atgaatagtgcaccattacgtgcaaatgctccccagcctccactagattcttcattttca
gcttccagaccatcgtttcagccatcttttcccccaccagagtcaacttatcctgcagca
agagccaatttacagccatcttttcctggttatccaagcaagcagtctaatgcagttcca
caagcacctgctgtacagtctccttttcttactcaacaaggaggttatgcagcagcccca
ccaacatcttctcccccttttcttgctcaaccaggaggttacatcccacctccaccagtt
gctgcaccattaggcctgcattcaagggaacaaatgcaacatccaggcactggacctcct
ataggagctgtccagggcttgatagaagatttcagctctctttctgttggatctgttcct
ggatcaattgatctagggattgattcaaaagcattgccaaggccattggaaggtgacgtt
gaaccaaattcctttgctgagatgtatcccatgaattgtcattccagatatctacggctg
acaacttctggtataccaaattcccagtcattggtttcaaggtggcatttgcctctagga
gcagttgtttgtcctcttgcggtgcctcctgatggggaggaagtaccaatcgtcaatttt
gctgcaactggcattattcgttgtagaagatgtcgcacatatgtgaatccgtatgtgaca
tttactgatggtggcagaaagtggcgttgcaacatctgttctttgctcaatgatgtttct
ggtgattatttctcccatttggatgcaattggcagaagaattgatttggatcaacgtcct
gagcttattaagggtagtgtggaatttgttgctcccactgaatatatggttcgtcctcca
atgccaccactatattttttcctcatcgacgtatcactatctgcggttaggagtggtatg
cttgaggttgtagcacaaactattagatcttgcttggatgagctacctggttccaccaga
acacagattggtttcataacttttgacggcaccattcatttttataatatgaagtcgtca
ttgacacagcctcaaatgatggtagtctcagatctagatgatatatttgttccattgcca
gatgatctccttgtgaatttgtccgaatcaagaagtgtggtggaaacatttctagatagc
ttgccatctatgtttcaggacaatgtcaacatagaatctgcgtttggtccagctcttaag
gctgcttttatggttatgagccaacttgggggtaaattgttgattttccagaatacactg
ccttctcttggcgttggccgcctgaagctgcgtggtgatgaccttcgtgtttatggaact
gataaagaacatgcattgagattacctgaagatccattttataagcaaatggctgctgat
cttactaagtaccagatagcggcgaatatatatgctttcagtgacaaatacacagatata
gcctccttaggaactttggcaaagtacactggtggtcaggtatactactacccaagcttc
ttatcaatcattcaccaagataggttgagacatgagctatccagggaccttacaagggaa
actgcctgggaagctgtcatgcgcataagatgtggcaaaggtgtgcggtttacatcttat
catgggaacttcatgctaagatccactgatttgttagcccttccagctgtagactgtgat
aaagcttttgcaatgcagttatgtcttgaagagactttactaacaactcagactgtatat
ttccaagttgctctgctatacacttcatcttctggagaaaggcgaatcagggtacataca
gcagcagcaccagtggttgcagatctgggagagatgtaccgccaggctgatactggtgct
gtagtgtctttattttgtaggctagcaattgagaaaactttgtcccataagctggaagat
gcacggaactccgtgcaattaaggcttgtcaaggccttcaaagaatatcgaaatctttat
gctgtgcagcatcggttgggaggcaggatgatatatccagaatctttgaagcttttgcct
ttgtatgcattagcactgtgtaaatcaacacctctacgtggagggtatgctgatgctcag
ctcgatgaacgctgtgcagcaggttatactatgatgactttacctgttaaaagattattg
aagcttctatatcctagcttgattcggattgatgagtatcttttaaagccaactgctcag
gcagatgagttgaaaaggttaccactagttgcggagagcttagattctagaggtctatat
atttatgatgatggttttcgctttgttatttggtttggaagaatgctttcacctgaaata
gctatgaatctacttgggcaagactttgctgctgatttatcgaaggttagtctttatgag
catgacaatgaaatgtcaagaaagctaatgggcatacttaagaaatttagggagagtgat
ccttcatattatcagctatgccatcttgtaagacaaggtgaacaaccaagagaaggtttc
tttttacttgcaaatcttgttgaagaccagattggaggtaccaatggctatgctgattgg
attttgcaaatacaccgacaagtacagcaaaatgcgtga
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integrated database retrieval system
