Vitis riparia (riverbank grape): 117909979
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Entry
117909979 CDS
T07274
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00040
Pentose and glucuronate interconversions
vri01100
Metabolic pathways
Module
vri_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
117909979
Enzymes [BR:
vri01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
117909979
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
117909979
NCBI-ProteinID:
XP_034679915
LinkDB
All DBs
Position
Unknown
AA seq
287 aa
AA seq
DB search
MAPFEGLYGRKFRSPICWDDVGERKLLGPELVQLIVEKVALIKERLKTAQSRQKSYVDNR
RRDLEFEDRFSFFILCMVTLSSFSSTTNASSPLYDVMNYGAVGDRKTDDSQAFLKAWNET
YNVQQQCATLNVPAKTFLLNPIEFSGPCVPTSIEFQVAGKIIASTNKSLFENNHWILFSY
VKGLTLTGSGTIDGQGAGSWQDRTRVPALKIYTCPDLVLQGLTHINPQKAHIILTKCDGA
NINNITISAPEDAPNTDGIDIGGSNHVRVQKSKYDMAGGYYLLQHSS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggcaccttttgaggggctatatggtaggaaatttcgttctcctatttgttgggatgat
gttggagaaaggaaacttttggggcctgaacttgtgcagttgatagttgaaaaagttgcc
ttaattaaagagagattaaaaacagctcaaagtaggcagaaaagttatgttgacaatcgc
aggcgggatttggagtttgaggatcgtttctccttcttcattttatgcatggtaacatta
tccagcttcagcagtactacaaatgcaagctcgcctttatatgatgtgatgaattatgga
gctgttggtgatagaaaaaccgatgattctcaggcatttctgaaggcatggaatgaaacc
tacaacgttcaacaacagtgtgctacccttaatgtaccagcgaagacattcttattgaat
cctatcgaattttcgggtccatgtgtgcccacttctatcgaatttcaggtggcaggaaaa
attatagcaagcaccaataaatccctatttgagaacaatcattggatcctcttctcatat
gtgaaagggcttactttgaccggaagtggaactatagatggccaaggggcaggttcatgg
caagaccgaacgagagtacctgcactcaagatttatacttgcccggacctagtacttcaa
ggattgacacatatcaatccccaaaaggcccatatcattttgacaaaatgtgatggagca
aacatcaataacatcactataagtgcacctgaagatgccccgaacacggatggtatcgac
attggcggttcaaaccatgttcgagtccagaaaagcaaatatgacatggctggtggttat
tacttattacaacatagttcttag
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