Vitis riparia (riverbank grape): 117910045
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Entry
117910045 CDS
T07274
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00040
Pentose and glucuronate interconversions
vri01100
Metabolic pathways
Module
vri_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
117910045
Enzymes [BR:
vri01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
117910045
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
117910045
NCBI-ProteinID:
XP_034679991
LinkDB
All DBs
Position
Unknown
AA seq
465 aa
AA seq
DB search
MVQNCPHNKKFVIGKPKEENKEDKQKPRAQGWVFAMTHRDAQATYDVVIVLHTDCVVCCD
DRIVSILLTNMKDRFSFFILCMVTLSSFSNTTNASSPLYDVMNFGAVGDGKTDDSQAFLK
AWNEACNVQQQRATLNVPARTFLLNPIEFSGPCVPTSIEFQVAGKIIASTNKSLFDNNHW
ILFSYVKGLTLTGSGTIDGQGAGSWQDRTGVAALKFYTCPNLVLQGLTHINPQKAHIILT
KCDGANINSITITAPEDSPNTDGIDIASSNHVQVQNSKIGTGDDCIAISARCSFINITGV
TCGPGHGISIGSLGDPGSGDFDTVSEVHVRSCNFTGTNTTGIRIKTWQGGQGEVKKITYE
DIMFDNVRNPIVIDQFYCPHNVCKNNTGTSAVAISDVSYTGIIGTSSGDEVMSLNCGTES
SCNNIVLDDVHLKTSDPTKTAFVRCVNFNGRASNVEPSLDQCLNS
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggttcagaattgtccacataataaaaagtttgtcattgggaagcctaaggaggagaat
aaagaggataaacagaagcctagggcccaagggtgggtgtttgccatgactcatcgagat
gctcaggctacttatgatgttgtgatagtactgcatactgattgtgttgtttgctgtgac
gatagaatagtgagcatccttctcaccaatatgaaggatcgtttctccttcttcattttg
tgcatggtaacattatccagcttcagcaatactacaaatgcaagctcgcctttatatgat
gtgatgaattttggagctgttggtgatggaaaaaccgatgattctcaggcatttctgaag
gcatggaatgaagcctgcaacgttcaacaacagcgtgctacccttaatgtaccagcgagg
acattcttattgaatcctatcgaattttcgggtccatgtgtccccacttctatcgaattt
caggtagcaggaaaaattatagcaagcaccaataaatccctatttgacaacaatcattgg
atcctcttctcatatgtgaaggggcttactttgaccggaagtggaactatagacggccaa
ggggcaggttcatggcaagaccgaacgggagtagctgcactcaagttttatacttgcccg
aacctagtacttcaaggattgacacatatcaatcctcaaaaggcccatatcattttgaca
aaatgtgatggagcaaacatcaatagcatcactataactgcacctgaagattcccctaac
acggatggtatcgacattgctagctcaaaccatgttcaagtccagaactccaaaattgga
acaggtgatgactgcattgctattagtgcaagatgttcctttatcaatataaccggcgtc
acatgtggacctggccatggtattagcattggatcactgggagatcctggatcaggtgac
ttcgacacggtgtcagaagtacatgtgcgaagttgtaattttacaggaaccaacactact
ggaattaggatcaagacatggcagggagggcagggagaagtaaagaaaataacatatgaa
gacattatgtttgacaatgtccgcaacccaattgtcattgatcaattttattgtcctcac
aacgtctgcaaaaacaataccggtaccagtgcagtggcaataagcgatgtatcatacacc
ggaataattgggacgtcaagtggagacgaggtgatgtctttgaattgtggtaccgaaagt
tcatgcaacaatattgtgcttgatgatgtccacttaaagacctcagatccaacgaagacg
gcttttgttcgttgtgtcaattttaatggaagagcatcgaatgtagagccttcccttgac
caatgcctgaactcctga
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