Vitis riparia (riverbank grape): 117910445
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Entry
117910445 CDS
T07274
Name
(RefSeq) LOW QUALITY PROTEIN: WD-40 repeat-containing protein MSI1-like
KO
K10752
histone-binding protein RBBP4
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03082
ATP-dependent chromatin remodeling
vri03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117910445
03083 Polycomb repressive complex
117910445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vri03036
]
117910445
Chromosome and associated proteins [BR:
vri03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
117910445
Histone modification proteins
HAT complexes
HATB complex
117910445
HDAC complexes
Sin3A-HDAC complex
117910445
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
117910445
PRC2.2
117910445
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
117910445
Heterochromatin formation proteins
Other heterochromatin formation proteins
117910445
Chromatin remodeling factors
NuRD complex
117910445
NuRF complex
117910445
NuRF complex (fruit fly)
117910445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WDR55
WD40_RFWD3
Beta-prop_EML
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_RIG_1st
WD_LRWD1
eIF2A
Beta-prop_WDR19_1st
MIOS_WD40
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
117910445
NCBI-ProteinID:
XP_034680403
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MGKDEEEMRGXIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKD
YSVQKMILGTHTSENEPNYLMLAQVQLPLEDAENDARQYDDDRFDVGGFGCANGKVQIIQ
QINHDGEVNRARYMPQNSFIIATRQLXCRVYVFDYSKHPSKPPLDGACSPDLRLRGHSTE
GYGLSWSQFKQGHLLSGSDDAQICLWDINATPKNKALEAQQIFKVHEGVVEDVAWHLRHE
YLFGSVGDDQYLLIWDLRTPSVSKPIQSVIAHQSEVNCLAFNPFNEWVVATGSTDKTVKL
FDLRKINTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE
DGPPELLFIHGGHTSKISDFSWNPCEDWVIASVAEDNILQIWQMAENIYHDEDDLPGEES
TKAS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggatgaggaagagatgagagggnagatagaagagaggttaatcaatgaagaa
tacaaaatttggaagaagaatactccatttttatatgatttggttatcacacatgcattg
gagtggccgtcgcttactgtggaatggcttcctgatagagaggagcctcctggcaaggac
tattctgtacagaagatgattttagggacacacacttctgagaatgagcccaattacttg
atgcttgcacaagttcagctccctttggaagatgctgagaacgatgctcgtcagtatgat
gatgatcgctttgatgttggtggttttggttgcgccaatggcaaggtacaaattatccag
caaataaatcatgatggagaggttaacagggcacgctatatgcctcaaaactcgtttatt
attgctaccagacagttanngtgcagagtttatgtttttgattatagcaaacatccatct
aagcctcctctagatggtgcatgcagtcctgatttgagattgaggggccacagtaccgaa
ggatatggtttatcatggagtcagttcaagcagggtcatttactgagtggttctgatgat
gctcaaatatgtttgtgggacatcaatgcaactcctaagaacaaagctcttgaggctcag
cagattttcaaggttcatgaaggtgttgtagaagatgtagcatggcatctgaggcatgaa
tacttatttggttcagttggggatgatcagtacctgcttatatgggatcttcggacacca
tcggtcagcaagcctatccaatctgtaattgctcatcaaagtgaggtaaactgcttagct
ttcaatccctttaatgaatgggttgtggcaacgggctctactgataagactgttaagttg
tttgatctacgcaagatcaacactgctctccatactttcgattgtcacaaggaagaggtg
ttccaagttggatggaatccaaagaatgagactatcttggcttcttgttgtcttggtcgg
aggctcatggtctgggatcttagcaggattgatgaggagcagactccagaggatgctgaa
gacggcccaccagagttgctcttcattcatggtggtcatacgagtaaaatttcagatttt
tcatggaacccatgtgaggattgggttattgctagtgtagctgaagataacatactccag
atctggcaaatggcagagaacatctaccatgatgaggacgatttaccaggagaggaatcc
acaaaagcttcttag
DBGET
integrated database retrieval system
