KEGG   Vitis riparia (riverbank grape): 117910889
Entry
117910889         CDS       T07274                                 
Name
(RefSeq) tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
vri  Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:vri00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vri03016]
    117910889
Enzymes [BR:vri01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     117910889
Transfer RNA biogenesis [BR:vri03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    117910889
SSDB
Motif
Pfam: Dus zf-CCCH_DUS3L zf-CCCH zf-CCCH_4 zf_CCCH_4 DEAD_2 zf-CCCH_2
Other DBs
NCBI-GeneID: 117910889
NCBI-ProteinID: XP_034680961
LinkDB
Position
3:565677..572048
AA seq 678 aa
MDGSSVELVEEAKATERAEKTPEELVAKAIAPVKREFLRPPPLRPCNDVASDSKFTPSTF
VKEKKSKRQLKRERRQEQKSALNICSEIAKTGNVNACPYNENCRFSHDLEAYKAQKPDDL
EGSCPFTSAEGACPYGLACRFSGTHKDGVAAGNLNLHKKNSEINGLNKDVQKLLWKNKIR
FPKADAKLKLLGLLGKANSKIKTFEDKGEGDLKVSNGTHATNDNSCGELVIDSDNKVEGS
PKMPEEDDVEGFATDEPRPTKKIKSATNEECCTGNADNGASVQEKDLGKSCAQIEPESTT
DNIFSESDGCLKLHPREKKLIDFREKLYLAPLTTVGNLPFRRVCKMLGADVTCGEMAMCT
NLLQGQASEWALLRRHSAEDLFGVQICGAYPDTVARTVELIDQECEVDFIDINMGCPIDI
VVNKGAGSALLTKPMRMKNIIEAASGIVDKPITVKVRTGFLEGRNRVDSLIADIGQWGAN
VVTIHGRSRQQRYSKLADWEYIYQCARKAPEALQVLGNGDIFSYLDWNKHKSGCPELSTC
MIARGALVKPWIFTEIKEQRHWDISSGERLNILKDYVRCGLEHWGSDTKGVETTRHFMLE
WLSYTYRYVPVGLLDVIPQQLNWRPPSYFGRDDLETLMASDSAADWIRISEMLLGKVPPG
FSFAPKHKSNAYDRAENG
NT seq 2037 nt   +upstreamnt  +downstreamnt
atggacgggtcgtcggtagagctcgtcgaagaagcgaaggctacagagagagcggagaaa
acaccagaagaacttgtcgccaaggccatagctcctgtgaagagagagttccttcgtcct
ccgcctctcaggccttgtaacgacgttgcttcggactccaagttcactccttcaaccttc
gttaaggagaagaaatccaaacgccagctcaaacgagaacgccgccaggagcaaaaatca
gccctaaatatctgttccgagattgctaagacaggcaatgttaatgcatgtccttataat
gaaaattgccgcttcagccatgacttggaagcctacaaggctcagaaaccagatgattta
gagggaagctgtcccttcacaagtgctgaaggagcatgcccttatggtttggcttgtaga
ttttctggtacccataaagatggtgttgctgctggaaatttgaatcttcataagaaaaac
tctgaaattaatggactgaacaaagatgttcagaagcttttgtggaaaaacaagataagg
ttccccaaggcagatgctaaactcaaacttcttggtcttctggggaaggccaattcaaaa
attaaaacattcgaagataaaggggaaggtgatctgaaagtttcaaatggtactcatgct
actaatgataatagttgtggtgaattggtcattgactcagataataaagtagagggctct
ccaaaaatgccagaagaggatgatgttgagggatttgcaactgatgaacctagacccacg
aagaaaataaaatctgcaactaatgaggagtgttgcactggaaatgcagataatggtgca
tctgtccaggagaaagatttagggaaaagctgtgcccaaattgaaccagagtcaacaact
gataatattttttctgaaagtgatggttgtctaaaattgcacccacgtgagaagaagctt
attgattttagagaaaagttgtatcttgcacctctaaccactgttgggaatcttcctttc
cgaagggtttgcaagatgttgggagcggatgtaacatgtggggaaatggcaatgtgcaca
aatctcttgcagggtcaagcttcagaatgggcgctgctgaggcgacattcagcagaggat
ttgtttggcgtacagatatgtggggcatatcctgatactgtggcacgtactgttgaactc
atagaccaggagtgtgaagtggacttcattgatataaacatgggctgcccaatagatatt
gtcgttaacaagggtgctgggtcagctcttcttacaaagccaatgcgaatgaaaaacatt
atagaagcagcttctggcatagtggacaaacctataactgtcaaggtgcgaacaggtttt
ttagaagggcgaaatcgagttgattcattaattgcagatattggccaatggggagccaat
gtggtaaccatacatggtcgttcacgtcagcaacgctatagcaagcttgctgattgggag
tacatatatcagtgcgcgagaaaagcccctgaagctctgcaagtcctgggaaatggggac
atcttttcatatttagactggaacaagcacaagtcaggctgtcctgagctttctacatgc
atgattgctcgaggggctttagttaagccttggatatttaccgaaatcaaggaacagaga
cactgggatatcagttctggggaaaggttaaatattttgaaggattatgttcggtgtggc
cttgaacattggggttctgacacaaaaggagttgagacgacgaggcatttcatgctggaa
tggcttagctacacatacagatacgtccctgttggtctgttagatgttatcccacaacag
ctgaactggcggccaccctcctactttggccgcgatgaccttgagactctaatggcctct
gattctgcagctgactggattcgaatctctgagatgttgcttggcaaggttcctccaggc
ttctcatttgcaccaaagcacaaatccaatgcttatgacagagcagaaaacggttaa

DBGET integrated database retrieval system