Vitis riparia (riverbank grape): 117911047
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Entry
117911047 CDS
T07274
Name
(RefSeq) nuclear pore complex protein NUP160
KO
K14303
nuclear pore complex protein Nup160
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117911047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vri03019
]
117911047
03036 Chromosome and associated proteins [BR:
vri03036
]
117911047
Messenger RNA biogenesis [BR:
vri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117911047
Chromosome and associated proteins [BR:
vri03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117911047
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP160_helical_2
Beta-prop_Nup120_160
TPR_NUP160_120_M
HEAT_Nup120
TPR_Nup160_C
NUP160_helical
TPR_ANAPC2
Motif
Other DBs
NCBI-GeneID:
117911047
NCBI-ProteinID:
XP_034681097
LinkDB
All DBs
Position
3:complement(20070685..>20121907)
Genome browser
AA seq
1345 aa
AA seq
DB search
KFLFHCYAAPNILYLVTFYFLLLCLDLISDFYFPYFQFSDFVHELRDDAGIGRLWGFISR
GRMVSPVQDLVISEVAGRKLVFVLHFDGMLRVWDLLSHSKIFSCTMSSTPLPGATFLRLW
VGEANYDTSVIPLVILCRHALEVDMEMISIYHLRFSVGDRIIFFLEPSMQNIPSEEGKFI
DVKLTSNKIWMLKQDGLISHNLFHTKTNLEEGHCYALQETFVADQLFQSSEHCLDDLLWI
THSLFSTMKEQIVSFVSSIFLRRLLHPGVYHNSVLRTTLQDYNKHWTNSEFQSLTVDGLK
KEILSLIEHEGVPESPSTLIYCWKNFCMRYFHYWCKNSAPYGLLVDSSTGAVGLIRKDSL
SLFRCLEDIELLIYGSFDELGDFVNSGFDLYGDDLEREILFEVLRCISSISQQLGKTASA
LFYESLISAPIISSEEIVPRLLKILETGCSSSVAALPISDLGADGAWEKELANHKMLRKF
SVDMLLSLHALCNKASSWSRVLDVIESYLKFLVPRKMTQGVDSEVLFNINTSILVQATSQ
VAKVMFESALDILLLLSYLVNISGQIHMLHDDISRIQLELVPMIQEIVTEWLIIHFFSTT
PSESPALEDFSSQLSSLQIDSNIDRKSWNERLGKCDFTLAFMLLLNIRSSSGDLSHLSLR
SLPSPHSFVSSVRDFTSWMIWGSTGEESSAFFSHSTELASILLKHGQYDAVEYLLTIVDA
HSRKEKLSGSIQSSDGGWCTLHHLLGCCLLAQAQGGLNGIQKEKKICEAVRCFFRASSGE
GASQALQSLSSEAGLPHLGFNGHVSSAAWKLHYYQWAMQIFEQYNISEGACQFALAALEQ
VDEALGPQNDSCGEDPLNELATSFKGRLWANVFKFTLDLNHFYDAYCAIISNPDEESKYI
CLRRFIIVLYEHGAIKILCDGQLPFIGLTEKVERELAWKAERSDIAAKPNPYKLLYAFEM
HRHNWRRAASYIYLYSARLRTESVLRDCPNLSLTLQERLNGLSAAINALYLVHPACAWIN
PLLGGNPLHNEHYPSKKAKKMVEEQSSSNDAQLQKLHSYVDVEKLENEFVLTTAEYLLSL
ANVKWTYTGMQKLPSDLVDLLVETNLYDMAFTIVLKFWKGSGLKRELERIFIAMSLKCCP
NRVGSSLTRTHGLLLTSSKDDTAIHGSIDPDPSTQQSKGSNRWETLELYLEKYKGFNARL
PVIVAETLLRTDPQIELPLWLVHMFKGNQKESYWGMTGQESNTATLFQLYVDHGRYTEAT
TLLLEYIESFASMRPADIIHRKRPSAVWFPYTTIERLWCQLEEMISSGNMVDQCDKLKKL
LHGALLRHLNLLKVDSDDALSSSVR
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
aaatttctttttcattgttatgcagcccccaacattctgtatcttgtaactttctacttt
cttctgctgtgcttggacctcatttctgacttctatttcccttattttcaattctcagat
tttgtacatgagctgcgggatgatgcaggaattggtcgtttgtggggtttcatctcaagg
ggtaggatggtgtcgcctgttcaggatttagtaatatcagaggtggctggtagaaaactt
gtttttgtgcttcattttgatgggatgttacgagtatgggatcttttaagccatagcaag
attttcagttgtaccatgagctctacaccattgccaggagctacatttttaaggttatgg
gtgggtgaagctaactatgatacaagtgtaattcctttggtgatcttatgtagacatgct
ttggaagtcgacatggagatgatctccatatatcacctccgttttagtgtgggagacagg
atcattttctttttggagccctcaatgcaaaatatcccttctgaggaggggaaattcatt
gatgtgaaacttacttcaaataagatatggatgctaaaacaagacgggttgatatcacac
aacctgtttcatacaaaaactaatctggaagaaggacactgttatgctttgcaggaaact
tttgttgctgaccagctatttcaaagttctgaacattgtttggatgatcttctttggatc
acccattcactattttccactatgaaggagcaaattgtttcatttgtgtcttctattttc
ttacggaggctgcttcatcctggggtttatcataacagtgttctacgtacaacattacaa
gattataacaaacactggactaattctgagttccagtccttgactgttgatggactgaaa
aaggagatcctttcgctgattgaacatgagggtgtccctgaaagtccaagtacattaatt
tattgctggaaaaatttttgtatgcgctatttccattactggtgcaagaacagtgcacca
tatggtttgcttgttgactcctcgactggtgctgttggtctaatcagaaaagattcatta
tccttgttccgctgtttggaggatattgagctgcttatctatggttcttttgatgaactt
ggtgattttgtgaactctgggtttgatctgtatggtgatgatctagaacgtgaaattctt
tttgaagtgctccgatgcattagtagtatcagccaacaactgggcaaaactgcttcagca
ctgttttatgaatctcttattagtgcaccaatcatttcatctgaagaaattgttcctcga
ttactaaagatcttagagactggatgtagttcctcggtagcagcactccctatatcagat
cttggagcagatggtgcttgggagaaggaactggctaatcacaaaatgttgaggaaattt
tctgttgacatgcttttgtctcttcatgctttgtgcaacaaagctagctcatggagcagg
gttttggatgtcatagaaagctatttaaaatttcttgtacctcgaaaaatgacacaggga
gtggattctgaagtattatttaatatcaatacttccattttggtccaagctacttctcaa
gttgcaaaagtgatgtttgaatctgctttggacattcttctcttactaagctatctggtg
aacataagtgggcagatccatatgttgcatgatgatatatccagaatacagcttgagttg
gttccaatgattcaagaaattgttactgagtggcttatcattcatttctttagcaccaca
ccttctgagtcacctgctcttgaagatttcagttctcaactttcatcattacaaattgat
agcaacattgataggaaatcatggaacgagaggcttggaaagtgtgacttcacattggct
tttatgctattactaaatattcgaagttcctctggagatctaagccacctctctttaaga
tcccttcctagtccccacagctttgtttcttcagtacgggactttactagctggatgatt
tggggcagtactggagaagaatcatctgctttctttagccattcaactgagcttgcatca
atcctacttaagcatggccaatatgatgcagttgagtacctacttaccatcgtggatgcc
cattcacgcaaggaaaagttatctggaagtatccaaagtagtgatggtggatggtgcaca
ctccatcatcttctaggatgttgtcttcttgctcaggcacaaggtggcttaaatggaata
cagaaagaaaagaagatttgtgaagctgttcgctgcttcttcagagcttcatctggagag
ggagcttcacaggccttgcagagtttgtcttctgaagcaggattgccacaccttggtttc
aatggtcatgtatcatctgcagcatggaagcttcactattatcaatgggcaatgcagata
tttgagcaatataatatcagtgaaggtgcttgccagtttgctcttgctgcacttgaacaa
gttgatgaagcgcttggtccacaaaatgacagctgtggagaagaccctcttaatgaattg
gccacttcttttaaaggccgactatgggcaaacgtcttcaaatttactttagatctcaat
cacttctatgatgcttattgtgccataatatcaaatccagatgaagaaagcaaatacatc
tgcttaaggcgtttcataattgttctttatgaacatggtgccataaagattctttgtgat
ggtcaactacccttcattggtttaacagaaaaggttgagagagagctagcctggaaggca
gagcgatcagatattgcagcaaaaccaaacccgtataagttgctttatgcttttgaaatg
catagacataactggcgaagagcagcaagttacatatatctttattcagctcgtctgaga
actgaatcagtgctgagggattgcccaaacctatctctaacactgcaagagaggctgaat
gggctatctgctgctatcaatgctttatatcttgttcatcctgcatgtgcttggatcaat
cctctccttggaggaaatcctcttcacaatgagcattatccgagcaaaaaggctaaaaag
atggtggaagaacagtcttccagcaatgatgctcagcttcaaaaactccattcttatgtt
gatgttgagaaacttgaaaatgagtttgtgctaactacagcagaatatttgctctcatta
gcaaatgtcaaatggacatatactggaatgcaaaaactcccatcagatttagttgatctg
ttagtggagacaaacttatatgatatggcatttaccattgttctcaaattctggaagggt
tcaggattaaaaagggagctggaaagaattttcattgccatgtcattgaaatgctgtcca
aatagagtaggttcctcattgaccaggacacatggccttctgttgacatcatcaaaggat
gatacagccattcatggttctattgatccggatccttcaacccagcaatctaaggggagt
aatcgatgggaaacacttgagctatatcttgaaaaatataaaggatttaatgccagatta
ccagtaatagttgctgaaactcttcttcgcacagatccacagattgaattgcctctttgg
ttggttcatatgttcaagggtaatcagaaggaaagttattggggaatgactggccaagaa
tcaaatactgcaaccttatttcaactctatgttgatcatggtcgatatacagaagctacc
actctgctacttgagtacatagagtcatttgcatcaatgagaccagctgatataattcac
cggaagaggccatctgcagtttggtttccttacacaacaattgagcgtctatggtgccag
cttgaggaaatgatcagttcgggtaacatggttgatcaatgtgataagctgaaaaaacta
ctacatggagctttgctgagacatcttaaccttctaaaggtggactcagatgatgcacta
tcttcttctgtccggtaa
DBGET
integrated database retrieval system
