Vitis riparia (riverbank grape): 117911094
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Entry
117911094 CDS
T07274
Name
(RefSeq) WD-40 repeat-containing protein MSI2
KO
K10752
histone-binding protein RBBP4
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03082
ATP-dependent chromatin remodeling
vri03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117911094
03083 Polycomb repressive complex
117911094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vri03036
]
117911094
Chromosome and associated proteins [BR:
vri03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
117911094
Histone modification proteins
HAT complexes
HATB complex
117911094
HDAC complexes
Sin3A-HDAC complex
117911094
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
117911094
PRC2.2
117911094
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
117911094
Heterochromatin formation proteins
Other heterochromatin formation proteins
117911094
Chromatin remodeling factors
NuRD complex
117911094
NuRF complex
117911094
NuRF complex (fruit fly)
117911094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_EIPR1
WDR55
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR19_1st
WD_LRWD1
Beta-prop_HPS5
MIOS_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ANAPC4_WD40
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
117911094
NCBI-ProteinID:
XP_034681172
LinkDB
All DBs
Position
3:complement(1520828..1526998)
Genome browser
AA seq
402 aa
AA seq
DB search
MGEEEEMSVEQVEEEFTVWKKNTPFLYDLIISHPLEWPSLTVQFLPSPPLPYALDSFSVH
KLVLGTHTSDGFPNYLMVADAFLPRNTAAPSEQNPTIPKVEITKKIHVDGEVNRARCMPQ
NPDMVAAKTSGLEVYVFNRGKPSVGTEGRSCNPDLRLRGHEKEGYGLSWSPFKGGYVLSG
SNDCKVCLWDVSASAEDKVLGAMHVYEAHENVVEDVSWHLKNENLFGSVGDDCRLMIWDL
RSDKPQHSVIVHEKEVNFLSFNPYNEWILATASSDTTVGLFDMRKLNSPLHVLSSHTEEV
FQVEWDPNHETVLASSADDRRLMVWDLNRIGEEQLEGEAADGPPELLFSHGGHKAKISDF
SWNKNEPWVISSVAEDNSLQIWQMTEGIYRDEDGTQTADDHS
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagaagaagaaatgagtgttgagcaggtggaggaggagttcacagtgtggaag
aagaacactccatttctctacgatctcatcatctctcaccccctcgaatggccttctctc
accgttcaattcctcccatctcctccgctcccctacgccctcgactcattctccgttcac
aaacttgtcctcgggacccacacctccgacggcttccccaactacctcatggtcgccgac
gcattcctccccagaaacaccgccgccccatctgagcaaaaccccaccattcctaaggtg
gagataacgaagaaaatacatgtggatggagaagtaaatcgagctcggtgtatgccacaa
aacccagatatggttgctgctaagacaagtggtttggaagtatatgtttttaaccgtgga
aagccgtcggtggggaccgaaggacggtcttgcaatcctgatctgaggttaaggggtcat
gagaaagaagggtatgggttgtcttggagtccctttaaagggggttatgttttgagtggt
tcaaatgattgcaaggtatgcttatgggatgtgtctgcatctgctgaagataaagtgcta
ggcgcaatgcatgtttacgaggctcatgaaaacgtggtagaagatgtgtcctggcatttg
aagaatgaaaatctatttggatcagtgggggatgattgtcgattaatgatctgggacttg
cgctcggacaaacctcagcattctgttatagttcatgagaaagaggtgaattttctttct
ttcaatccatataatgaatggattctggctacagcatcttcagacactacagttgggctg
ttcgatatgcggaagctgaactcaccattgcatgttttaagcagccacacggaggaggta
ttccaggtagaatgggatcccaatcatgaaactgtgttggcttcttctgctgatgaccgg
aggttgatggtttgggatcttaacaggattggggaggagcagttagaaggcgaggctgca
gatggtcctcctgagcttctcttttctcatgggggtcataaagccaagatatcagacttc
tcctggaacaaaaatgagccatgggttatttcaagtgtagctgaggacaatagtcttcag
atctggcaaatgaccgagggtatttatcgagacgaggatggcacacaaactgctgatgat
cattcatag
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integrated database retrieval system
