Vitis riparia (riverbank grape): 117911098
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Entry
117911098 CDS
T07274
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' alpha isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117911098
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vri01009
]
117911098
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vri03019
]
117911098
03036 Chromosome and associated proteins [BR:
vri03036
]
117911098
Protein phosphatases and associated proteins [BR:
vri01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
117911098
Messenger RNA biogenesis [BR:
vri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
117911098
Chromosome and associated proteins [BR:
vri03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
117911098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Fzo_mitofusin
Motif
Other DBs
NCBI-GeneID:
117911098
NCBI-ProteinID:
XP_034681175
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All DBs
Position
3:complement(1892510..1896385)
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AA seq
543 aa
AA seq
DB search
MNLSLPVSSVIRENPYTPSSDITRLLPYETSLSFGLSFKTQQERKVKGKNQTFFFLSARL
LEGDRQEDRRGREMGVERNTPKASPKKKPTTTLQYLFDLDSKSNGNGHFSNSGKQSSLGS
ENEELLSIITYCTFVFTFTDPSESPSQQDLKRLKLSQLLSLVKSTKKPLHDQILSPLVAM
LSANLFRPLPPSSNASVIFDLPDEEDTASTPAPAWPHLQIVYEILLRLVLNTDAKALRDH
IDHSFVLNLLSLFQSEDPRERESLKNVYHRIYSKFTFYRSFMRKAMNDVFLHYVFETERP
CGIGDLLEIWGSIINGFTIPLKEEHKLFLMRVLIPLHKPKGLQVYHRQLAYCVSQFVQKE
PVLGGIVVRGILKYWPITNCQKQVLLVGELEELVEIIDPEQYRKLALPLFTQITRCLNSW
NSQVAERALYVLNNEQFMKMAQEAMDEVFPVIVEGMEKNLKWHWSKSVRQLTQTVKVMLE
EMEPCLYSKCVINLELRESAAQQEEIQRREKWERIERAADAATAATAAQNQFLQPPHCTC
VSN
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcagcttacctgtctcatctgtgattagggaaaatccatatactccatcatcg
gatattacaaggcttcttccctatgaaacatcgctgtcctttggcctttctttcaaaacc
caacaagaaagaaaggtaaaaggaaaaaatcaaacattttttttcctttctgcaagactg
ttagaaggagataggcaagaagataggagagggagagaaatgggtgtagaaagaaacacc
ccaaaagcctctcccaagaaaaaacctaccaccacccttcagtacctctttgatctggat
tctaagagcaatggcaatggccatttcagcaacagtgggaaacaatcttctctgggttcc
gaaaatgaagagctcctctctatcatcacatactgcacctttgtcttcacctttactgat
ccttctgaatctccttcacagcaagatctcaagaggctcaagctcagtcaacttctctcc
cttgtgaagtccacaaagaagcctctccatgatcaaattttgtcacctctggttgccatg
ctatctgccaacctctttcgccccctccctccatcttccaatgcctctgtcatctttgac
ttacctgatgaggaagacaccgcttctactcctgcacctgcttggccacacctgcaaatt
gtttatgagattcttcttcggctagtcctcaacacagatgccaaggcactgcgtgatcat
atagatcattcattcgttctcaacctcctctcccttttccaatctgaagacccacgagaa
cgggaaagcttgaagaacgtgtaccacaggatatattccaagttcaccttctaccgatca
ttcatgagaaaagcaatgaatgatgtattcttgcactatgtttttgagacagagcggccc
tgtggcattggcgatctgcttgaaatttggggcagcataatcaatggcttcaccattcca
ctcaaggaagagcacaagctattcttgatgagagtgcttattcccttgcacaagcccaag
gggttgcaggtttaccataggcagctggcttactgtgtctcccagtttgtgcagaaggag
cctgtgcttggtgggattgttgttcgaggtattctaaaatactggccgatcacaaactgc
cagaaacaagttttacttgtgggagaactggaagaattggtggagattatagatcctgag
caatataggaagttggctctgcctttattcacccaaatcacaaggtgcttaaacagttgg
aactcacaggtagcagagcgtgccctctacgtattgaacaacgagcagttcatgaagatg
gcacaagaggcaatggacgaggtgtttccagtgatagttgaaggcatggagaagaacctt
aaatggcactggagcaaaagcgttcgccaattgacacaaaccgtgaaggtgatgctggaa
gaaatggagccgtgtttatactccaagtgtgtaataaaccttgaactccgagaatctgca
gctcaacaagaggagatccaaagaagagagaaatgggaaaggattgaacgggctgctgat
gctgctactgctgctactgctgcccagaatcagttcctccaaccaccacattgtacatgt
gtttccaactga
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