Vitis riparia (riverbank grape): 117911121
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Entry
117911121 CDS
T07274
Name
(RefSeq) 26S proteasome regulatory subunit S10B homolog B-like
KO
K03064
26S proteasome regulatory subunit T4
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
117911121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
vri03051
]
117911121
Proteasome [BR:
vri03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
117911121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_16
AAA_5
AAA_2
RuvB_N
AAA_22
nSTAND3
PRS7_OB
IstB_IS21
Prot_ATP_ID_OB_N
DUF815
TIP49
AAA_7
AAA_33
Parvo_NS1
AAA_14
RNA_helicase
Mg_chelatase
AAA_18
Sigma54_activat
AAA_28
AAA_25
AAA_3
TsaE
AAA_24
AAA_lid_PRS2_C
NPHP3_N
NACHT
ABC_tran
AAA_11
bpMoxR
ATPase
NB-ARC
ATPase_2
ResIII
PhoH
AAA_30
AAA_19
Motif
Other DBs
NCBI-GeneID:
117911121
NCBI-ProteinID:
XP_034681211
LinkDB
All DBs
Position
3:2996181..3002514
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AA seq
399 aa
AA seq
DB search
MASEAEDAVRRRTTTTDYRKKLLQHKELESRVRSVRENLRAAKKEYAKTEDDLKSLQSVG
QIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTAGTRVVLDMTTLTIMRALPRE
VDPVVYNMLHEDPGNVSYAAVGGLSDQIRELRESIELPLMNPELFIRVGIKPPKGVLLYG
PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDE
IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGR
LDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSA
IRAERDYVIHEDFMKAVRKLNEAKKLESSAHYNADFGKD
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgaagcagaagacgccgtacgacgtcgtacaaccaccaccgactaccgtaag
aagctgctccagcacaaggagctcgagtccagagttcgatcagtgagagagaatttgcgg
gctgccaaaaaggaatatgctaaaactgaagatgatttgaaatcgcttcagagtgttggg
caaattataggcgaagttcttaggcctcttgacaatgaacgcttgatagtgaaagcaagc
agtggaccaaggtatgtggttggctgtcgcagtaaagtggacaaggaaaaactgactgca
ggcacccgtgtagttcttgatatgactactctcacaattatgcgggctcttccacgagaa
gttgatccagttgtatataacatgcttcatgaagacccaggtaatgttagctacgcagcg
gtgggaggtctgtcagatcagattcgagaactccgggaatccattgaattgcctctaatg
aatcctgagctctttattagggtggggattaagcctcccaagggtgttcttctctatgga
cctcctggaacaggcaagacactgttagccagagcaattgcgagcaacatagatgctaac
tttttgaaggttgtctcaagtgccattattgataaatatattggtgaaagtgcgagattg
ataagggagatgtttggatatgcacgagatcaccaaccctgtatcatttttatggatgag
attgatgccattggtgggcgtcgtttcagcgagggaacaagtgctgatcgtgaaattcag
agaacactcatggagttgctcaaccagctggatggatttgatcagcttgggaaggtcaaa
atgattatggcaacaaatagacctgatgttctggaccctgcacttcttcgtcctgggcga
ctggataggaagatagaaattccattgccaaatgaacaatccagaatggaaatccttaaa
atccatgctgctggaattgctaaacatggtgaaatcgactatgaagctgttgtaaagctg
gctgaggggtttaatggagccgatcttcgtaatgtttgcactgaagctgggatgtcagca
attcgtgcagaacgtgactatgtcatccatgaagatttcatgaaggctgtccggaaactg
aatgaggcaaagaaacttgaatcaagtgctcactacaatgctgattttggaaaagactaa
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