Vitis riparia (riverbank grape): 117911177
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Entry
117911177 CDS
T07274
Name
(RefSeq) protein RMD5 homolog
KO
K23333
E3 ubiquitin-protein transferase RMND5 [EC:
2.3.2.27
]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vri04121
]
117911177
Enzymes [BR:
vri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117911177
Ubiquitin system [BR:
vri04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
CTLH complex
117911177
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CTLH
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
zf-RING_5
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
Prok-RING_4
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
117911177
NCBI-ProteinID:
XP_034681308
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Position
3:complement(10345560..10361753)
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AA seq
383 aa
AA seq
DB search
MELSNIKDAFDRVAKKQKLSSSKSQEVIDQVGREIEDALAKLQADPASSVDQKCILMELK
TKLSIIGSQSQLEGSQKELNMNLSKYPRLLEKSFNPDISKAYRNVDFDFHTVNQIIASHF
YRQGLFDIGECLINEAGEPEDTALKSQFLEMFQILDAMKARDLEPALNWVSNNREKLKQN
GSNLELKLHRLQFVEILQKGGRADALNYARTYLAPFASLHMDEIQKLMACLLWVGRLDSS
PYSELMVPSLWEKLAEELTRQFCSLLGQSYESPLSVAIAAGIEGLPTLLKLANVMAAKKQ
EWQAMKQLPVPVDLGREFQFHSIFVCPVSRDQGSEENPPMLMPCGHVLCKQSIMKLSKSS
TRMFKCPYCPNESTVGQCMQLYF
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggagctgagtaacatcaaagatgcatttgatcgtgttgccaagaagcaaaaattatca
tcatccaaatcccaagaagtaattgaccaagttggccgtgaaattgaagatgcactggca
aaactccaggctgaccctgcctcttctgtggatcagaaatgcatccttatggagcttaaa
accaaacttagcataattggctcacaaagccagttggaagggtcacagaaggagctcaac
atgaaccttagcaagtaccccagactccttgagaaatccttcaatcctgacatatctaag
gcatacagaaatgttgacttcgatttccatacagtgaatcagatcattgcaagccatttt
taccgacaaggattgtttgatattggggagtgcttgataaatgaggctggagaaccagag
gacaccgccctaaaatctcaatttctggaaatgtttcaaatacttgatgctatgaaagct
agggacctcgagcctgctctgaactgggtgtccaataatcgggaaaaactaaagcagaat
ggttcgaatcttgagctgaagcttcacaggctgcagtttgtggaaattttgcagaaagga
gggcgagctgatgcactcaactacgctagaacttaccttgctccttttgcatcacttcac
atggatgagatccagaagcttatggcttgcctcttatgggtaggaaggcttgacagctcc
ccatattccgagttaatggttccatccctttgggagaaattggctgaggagctgacccgc
caattctgcagtctcttggggcagtcttatgagagtccattgagtgtggcaatagctgct
gggattgaaggcttgcctactctcttgaagctggcaaatgtaatggctgcgaagaagcag
gagtggcaggcaatgaaacagttgccagtaccagtggatttgggtagggaattccagttc
cactctatattcgtctgcccagtgagtagagatcaaggcagtgaagagaacccacctatg
ctgatgccgtgcggccatgttctctgtaagcaatcaatcatgaagctgtccaagagcagc
acccgcatgtttaagtgtccatactgtccgaatgaatctactgttgggcagtgcatgcaa
ctctacttctga
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