Vitis riparia (riverbank grape): 117911331
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Entry
117911331 CDS
T07274
Name
(RefSeq) ubiquitin domain-containing protein DSK2b-like isoform X1
KO
K04523
ubiquilin
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117911331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vri04131
]
117911331
03051 Proteasome [BR:
vri03051
]
117911331
Membrane trafficking [BR:
vri04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
117911331
Proteasome [BR:
vri03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
117911331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
UBA_7
UBA_NBR1_C
Dsc3_N
Rad60-SLD_2
UBA_HOIP
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
117911331
NCBI-ProteinID:
XP_034681546
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Position
3:2490732..2495198
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AA seq
559 aa
AA seq
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MGDEGDSRDSSVGGEGVIVNIRCSNGSKFSVRTCLESTVGAFKALLAQNCDVPSDQQRLI
YKGRILKDDQTLESYGLQADHTVHMVRGFAPAASTPVTGGTASATTAATAGSPLPPGSGV
RQGASSDESGGIGAAGMRSPLFPGLGLGGLGGTGASGLFGAGFPEFEQVQQQLTQNPNMM
REIMNMPAIQNLMNNPDLMRSLIMNNPQMREIIDRNPELAHILNDTGILRQTLEAARNPE
LMREMMRNTDRAMSNIESSPEGFNMLRRMYENVQEPFLNATTMSGDSGNTLGSNPFAALL
GNQGGAQARDGSNNPSTTGAEATAGLTAPNTNPLPNPWSAGGAQTNNTARSIPAGDARAP
SVAGLGGLGLPEMERMLNGMPDATLFNQLLQNPAVSQMMQSLLSNPQYMNQILNFNPQLR
GMLDMNPQLREIMQNPELLRQLTSPETMQQMMSLQQSLLSQLNRQQSTQEPGQTGGGTTA
GTPNNIGLDLLMNMFGGLGAGSLNVPNTPDVPPEQLYATQLSQLQEMGFFDTQENIRALR
ATSGNVHAAVERLLGNPGQ
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacgagggcgattcgagggactcaagcgtgggtggtgaaggagtcattgtcaac
attcgatgctccaacggctccaaattctcagtccggacctgccttgaatcgacggttggg
gctttcaaggctcttctggcgcagaactgcgatgttccatctgatcagcagcggttgatt
tataagggtcggatcttgaaagatgaccaaaccctagagagctatggtttgcaggcagat
cacactgttcacatggttcggggttttgccccagctgcgtcaacacctgtgactggtggt
actgcttctgctactaccgctgctactgctggaagtcctcttcctccaggttcaggtgtc
agacagggtgctagttccgatgaaagtgggggcattggagctgctggcatgaggtcacct
ttatttcctggacttggtctgggtggtttgggtggtactggagcatctgggttgtttgga
gctggatttcctgaatttgagcaagtgcagcagcaattgactcagaaccccaatatgatg
agggaaataatgaatatgcctgccattcagaacttaatgaataatcctgacctaatgcgc
agcttgattatgaataaccctcaaatgcgcgagatcattgaccgaaatcctgagctggca
catatacttaatgatactggcatcctccggcagaccttggaggctgcaaggaaccctgag
ctgatgcgtgagatgatgcgaaacacagatagggcaatgagtaacattgaatcttctcct
gagggattcaacatgctcaggcgtatgtatgaaaatgttcaggaaccatttcttaatgct
acgacaatgtctggtgacagtggaaacactttgggttcaaacccatttgcggccctttta
gggaatcaaggtggggcccaagccagagatgggtctaacaacccttctaccactggtgct
gaagcaacggccgggcttactgctccaaatactaacccacttcctaatccttggagtgct
ggtggtgcccagacaaacaatactgcgaggtcaattcctgctggggatgcaagggctcca
agtgttgctggtttgggagggcttggtctcccagagatggaacgcatgcttaatggcatg
ccagatgctaccttatttaatcagttgttgcaaaacccagctgtgtcccagatgatgcaa
agcctactttccaacccccagtatatgaatcagattctcaacttcaacccacaactgcgt
ggtatgcttgatatgaatcctcaattaagagaaataatgcaaaacccagaacttcttcgt
cagttaacttcccctgagacaatgcagcaaatgatgtctttgcagcagtcacttctctct
caacttaatcggcagcaatcaacccaggaaccaggtcagactggtggtgggactacagca
ggaacacccaataatattgggttggacttgttgatgaacatgtttggtgggcttggagct
gggagcttgaatgttccaaatacgcctgatgtaccacctgaacaactctatgcgactcaa
ttgtcacaacttcaagaaatgggtttttttgacactcaagagaacatcagggcactgcgg
gctacttctgggaatgttcatgctgcggtggaacgtctcctgggtaatcctggccaataa
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